Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5JTC

Aspartyl/Asparaginyl beta-hydroxylase (AspH)oxygenase and TPR domains in complex with manganese, 2,4-pyridine dicarboxylate and factor X substrate peptide fragment(39mer-4Ser)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I04
Synchrotron siteDiamond
BeamlineI04
Temperature [K]100
Detector technologyPIXEL
Collection date2013-09-26
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9763
Spacegroup nameP 21 21 21
Unit cell lengths50.020, 91.660, 123.050
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution73.508 - 2.240
R-factor0.1826
Rwork0.181
R-free0.20850
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5jqy
Data reduction softwarexia2
Data scaling softwarexia2
Phasing softwarePHASER
Refinement softwarePHENIX (dev_2386)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]91.6602.300
High resolution limit [Å]2.2402.240
Rmerge0.1030.895
Number of reflections28029
<I/σ(I)>19.83.2
Completeness [%]100.0100
Redundancy13.113.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.527720% PEG3350, 200mM NaBr, 100mM BisTris Propane, 1mM MnCl2, 2mM 2,4-PDCA, 330uM ASPH, 726uM Factor X

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon