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5JE4

Crystal structure of Burkholderia glumae ToxA Y7A mutant with bound S-adenosylhomocysteine (SAH)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2011-10-21
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameP 21 21 21
Unit cell lengths46.515, 66.622, 145.056
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution38.100 - 1.932
R-factor0.1703
Rwork0.168
R-free0.22670
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)Burkholderia glumae ToxA Y7A mutant with bound SAH
RMSD bond length0.006
RMSD bond angle0.794
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10-2155-000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.1002.000
High resolution limit [Å]1.9301.930
Rmerge0.0990.495
Number of reflections32710
<I/σ(I)>13.74.2
Completeness [%]94.597.5
Redundancy5.55.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29518 - 23% polyethylene glycol monomethyl ether 2000, 100 mM Tris, pH 6.1 - 6.8, 6 mM SAH, and 1 mM toxoflavin

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