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5JDY

Crystal structure of Burkholderia glumae ToxA Y7F mutant with bound S-adenosylhomocysteine (SAH) and toxoflavin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
Collection date2011-11-20
DetectorADSC QUANTUM 210
Wavelength(s)0.97670
Spacegroup nameP 1 21 1
Unit cell lengths45.185, 71.170, 78.151
Unit cell angles90.00, 100.75, 90.00
Refinement procedure
Resolution19.764 - 1.770
R-factor0.15
Rwork0.148
R-free0.19400
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)Burkholderia glumae ToxA Y7F mutant with bound SAH
RMSD bond length0.008
RMSD bond angle0.923
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10-2155-000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]19.8001.830
High resolution limit [Å]1.7701.770
Rmerge0.0630.164
Number of reflections46227
<I/σ(I)>14.44.7
Completeness [%]97.292.3
Redundancy2.82.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29518 - 23% polyethylene glycol monomethyl ether 2000, 100 mM Tris, pH 6.1 - 6.8, 6 mM SAH, and 1 mM toxoflavin

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