5IQE
Aminoglycoside Phosphotransferase (2'')-Ia (CTD of AAC(6')-Ie/APH(2'')-Ia) in complex with GMPPNP, Magnesium, and Neomycin B
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-26 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 90.180, 100.360, 93.940 |
Unit cell angles | 90.00, 105.30, 90.00 |
Refinement procedure
Resolution | 90.610 - 2.500 |
R-factor | 0.17108 |
Rwork | 0.169 |
R-free | 0.21450 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5byl |
RMSD bond length | 0.013 |
RMSD bond angle | 1.487 |
Data reduction software | iMOSFLM (0.1.27) |
Data scaling software | Aimless (0.3.11) |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.610 | 2.570 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.114 | 1.047 |
Number of reflections | 55974 | |
<I/σ(I)> | 10.6 | 2 |
Completeness [%] | 100.0 | 100 |
Redundancy | 4.7 | 4.7 |
CC(1/2) | 0.991 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 296 | 80-120mM MgCl2, 8% glycerol, 10% PEG 3350, 100mM HEPES pH 7.5 |