Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5IQE

Aminoglycoside Phosphotransferase (2'')-Ia (CTD of AAC(6')-Ie/APH(2'')-Ia) in complex with GMPPNP, Magnesium, and Neomycin B

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyCCD
Collection date2013-11-26
DetectorRAYONIX MX-300
Wavelength(s)0.9795
Spacegroup nameP 1 21 1
Unit cell lengths90.180, 100.360, 93.940
Unit cell angles90.00, 105.30, 90.00
Refinement procedure
Resolution90.610 - 2.500
R-factor0.17108
Rwork0.169
R-free0.21450
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)5byl
RMSD bond length0.013
RMSD bond angle1.487
Data reduction softwareiMOSFLM (0.1.27)
Data scaling softwareAimless (0.3.11)
Phasing softwareREFMAC
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]90.6102.570
High resolution limit [Å]2.5002.500
Rmerge0.1141.047
Number of reflections55974
<I/σ(I)>10.62
Completeness [%]100.0100
Redundancy4.74.7
CC(1/2)0.991
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.529680-120mM MgCl2, 8% glycerol, 10% PEG 3350, 100mM HEPES pH 7.5

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon