5EHC
Co-crystal structure of eIF4E with nucleotide mimetic inhibitor.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04-1 |
Synchrotron site | Diamond |
Beamline | I04-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-07-08 |
Detector | DECTRIS PILATUS 300K |
Wavelength(s) | 0.9173 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 38.489, 52.177, 125.698 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.345 - 2.400 |
R-factor | 0.2205 |
Rwork | 0.218 |
R-free | 0.26420 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2w97 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.027 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.849 | 28.345 | 2.530 |
High resolution limit [Å] | 2.400 | 7.590 | 2.400 |
Rmerge | 0.031 | 0.339 | |
Rmeas | 0.210 | ||
Rpim | 0.082 | 0.014 | 0.140 |
Total number of observations | 66558 | 2132 | 9752 |
Number of reflections | 10425 | ||
<I/σ(I)> | 8.9 | 17.5 | 5.3 |
Completeness [%] | 99.7 | 97.4 | 99.7 |
Redundancy | 6.4 | 5.6 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 291 | 21-31% PEG 8000, 1???3% (NH4)2SO4, 100 mM HEPES, pH 7.5, 1 round of seeding |