5EB8
Crystal structure of aromatic mutant (F4W) of an alkali thermostable GH10 xylanase from Bacillus sp. NG-27
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU ULTRAX 18 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2012-06-06 |
Detector | RIGAKU |
Wavelength(s) | 1.54179 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 55.270, 77.320, 176.750 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 88.375 - 2.220 |
R-factor | 0.1706 |
Rwork | 0.168 |
R-free | 0.21390 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2f8q |
RMSD bond length | 0.009 |
RMSD bond angle | 1.228 |
Data reduction software | SCALA |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0049) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 88.375 | 18.970 | 2.330 |
High resolution limit [Å] | 2.219 | 7.000 | 2.210 |
Rmerge | 0.065 | 0.200 | |
Rmeas | 0.089 | ||
Rpim | 0.033 | 0.027 | 0.081 |
Total number of observations | 270609 | 8552 | 33188 |
Number of reflections | 38071 | ||
<I/σ(I)> | 15.1 | 23.9 | 6.9 |
Completeness [%] | 98.4 | 95.2 | 89.8 |
Redundancy | 7.1 | 6.6 | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 8.5 | 293 | 0.1M NaCl, 120mM MgCl2, 0.1M Tris-HCl pH 8.5, 18% PEG 8000 |