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5DB4

Mycobacterium abscessus NadD in complex with Mg-ATP, space group I41

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-04-18
DetectorRAYONIX MX300-HS
Wavelength(s)1.0000
Spacegroup nameI 41
Unit cell lengths67.098, 67.098, 229.538
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution57.380 - 2.280
R-factor0.1961
Rwork0.193
R-free0.24830
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4ymi
RMSD bond length0.009
RMSD bond angle1.279
Data reduction softwareXDS (November 3, 2014)
Data scaling softwareXSCALE (November 3, 2014 BUILT=20141118)
Phasing softwarePHASER (2.5.7)
Refinement softwareREFMAC (5.8.0124)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]57.3802.340
High resolution limit [Å]2.28010.2002.280
Rmerge0.0670.0261.040
Rmeas0.0750.0291.155
Total number of observations118283
Number of reflections228292621697
<I/σ(I)>16.852.221.69
Completeness [%]99.198.198.7
Redundancy5.25.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.62980.02M HEPES pH 7.6, 14% PEG3350, 0.002M Mg-ATP

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