4ZGC
Crystal Structure Analysis of Kelch protein (with disulfide bond) from Plasmodium falciparum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2015-03-02 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.942, 117.634, 74.508 |
Unit cell angles | 90.00, 113.77, 90.00 |
Refinement procedure
Resolution | 36.486 - 2.500 |
R-factor | 0.1948 |
Rwork | 0.192 |
R-free | 0.25310 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4yy8 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.139 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.123 | 0.086 | 0.589 |
Rmeas | 0.154 | 0.108 | 0.735 |
Rpim | 0.091 | 0.064 | 0.436 |
Total number of observations | 88485 | ||
Number of reflections | 33667 | ||
<I/σ(I)> | 8.9 | ||
Completeness [%] | 98.4 | 98.9 | 96.7 |
Redundancy | 2.6 | 2.5 | 2.6 |
CC(1/2) | 0.965 | 0.646 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | PEG 3350 |