4XG0
Crystal structure of a domain of unknown function (DUF1537) from Bordetella bronchiseptica (BB3215), Target EFI-511620, with bound citrate, domain swapped dimer, space group C2221
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-10 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 63.064, 92.903, 133.157 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.683 - 1.700 |
R-factor | 0.2006 |
Rwork | 0.199 |
R-free | 0.23650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4xfr |
RMSD bond length | 0.011 |
RMSD bond angle | 1.305 |
Data reduction software | MOSFLM |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 32.090 | 32.090 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.098 | 0.076 | 0.904 |
Rpim | 0.038 | 0.033 | 0.358 |
Total number of observations | 318618 | 1366 | 16560 |
Number of reflections | 43285 | ||
<I/σ(I)> | 10 | 17.3 | 2.1 |
Completeness [%] | 99.8 | 76.8 | 100 |
Redundancy | 7.4 | 5.2 | 7.3 |
CC(1/2) | 0.998 | 0.992 | 0.753 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 298 | Protein (39.6 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT,); Reservoir (MCSG2(H6); 0.8 M Ammonium Sulfate, 0.1 M tri-Sodium Citrate, pH 4); Cryoprotection (80% 1.8 M LiSO4, 20% Reservoir |