4TW2
Crystal Structure of SCARB2 in Neural Condition (pH7.5)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B1 |
Synchrotron site | SPring-8 |
Beamline | BL26B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-04-13 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 0.91998 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 57.796, 100.317, 105.173 |
Unit cell angles | 90.00, 98.69, 90.00 |
Refinement procedure
Resolution | 47.154 - 2.889 |
R-factor | 0.2463 |
Rwork | 0.244 |
R-free | 0.29350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f7b |
RMSD bond length | 0.007 |
RMSD bond angle | 1.369 |
Data reduction software | SCALEPACK |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.900 |
High resolution limit [Å] | 2.800 | 6.030 | 2.800 |
Rmerge | 0.105 | 0.059 | 0.535 |
Number of reflections | 28574 | ||
<I/σ(I)> | 11.6 | ||
Completeness [%] | 99.1 | 98.6 | 93.1 |
Redundancy | 3.7 | 3.7 | 3.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 289 | 0.1 mol/L HEPES (pH 7.5), 10% v/v 2-Propanol, 20% w/v Polyethylene glycol 4000 |