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4OTY

Crystal structure of lumiracoxib bound to the apo-mouse-cyclooxygenase-2

Replaces:  4LLZ
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-E
Synchrotron siteAPS
Beamline24-ID-E
Temperature [K]100
Detector technologyCCD
Collection date2012-10-05
DetectorADSC QUANTUM 315
Wavelength(s)0.97918
Spacegroup nameI 2 2 2
Unit cell lengths122.663, 133.173, 181.546
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.121 - 2.354
R-factor0.1811
Rwork0.180
R-free0.22140
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3nt1
RMSD bond length0.007
RMSD bond angle0.815
Data reduction softwareXDS
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.430
High resolution limit [Å]2.3502.350
Rmerge0.0730.493
Number of reflections61543
<I/σ(I)>6.76.7
Completeness [%]99.698
Redundancy5.83.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8291mCOX-2 protein reconstituted with a 2-fold molar excess of heme in phosphtate buffer, pH 6.7, 100 mM NaCl, 1.2% (w/v) -OG, and 0.1% NaN3, and 10-fold molar excess of inhibitors from 25 mM DMSO stocks were added to protein samples. Mixing 3 uL of the protein-inhibitor complex with 3 uL crystallization solution containing 50 mM EPPS, pH 8.0, 120 mM MgCl2, 22-26% PEG MME-550 against reservoir solutions comprised of 50 mM EPPS pH 8.0, 120 mM MgCl2, 22-26% PEG MME-550, VAPOR DIFFUSION, HANGING DROP, temperature 291K

220113

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