4NIQ
Crystal Structure of Vps4 MIT-Vfa1 MIM2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 190 |
Detector technology | CCD |
Collection date | 2013-04-23 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9998 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 38.476, 56.711, 84.233 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.998 - 2.301 |
R-factor | 0.2379 |
Rwork | 0.236 |
R-free | 0.25660 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.399 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
Rmerge | 0.044 | 0.023 | 0.336 |
Number of reflections | 8662 | ||
<I/σ(I)> | 14.7 | ||
Completeness [%] | 99.9 | 98.8 | 100 |
Redundancy | 7.1 | 6.4 | 7.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | 26% PEG 4000, 10% (v/v) isopropanol, 0.1M HEPES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |