Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4I6O

Crystal structure of chemically synthesized human anaphylatoxin C3a

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyCCD
Collection date2012-10-24
DetectorADSC QUANTUM 315r
Wavelength(s)0.95370
Spacegroup nameP 63
Unit cell lengths68.285, 68.285, 39.266
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution19.420 - 2.140
R-factor0.21839
Rwork0.208
R-free0.26793
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.017
RMSD bond angle1.907
Data reduction softwareMOSFLM
Data scaling softwareSCALA
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]39.2702.200
High resolution limit [Å]2.1402.140
Rmerge0.1060.787
Number of reflections5870
<I/σ(I)>15.93.4
Completeness [%]100.0100
Redundancy22.122
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5277VAPOR DIFFUSION, HANGING DROP, 1 uL 5 mg/mL lyophilized C3a in 2 mM hydrochloric acid + 1 uL reservoir (0.1 M Tris-HCl, 0.2 M ammonium phosphate monobasic, 49-51% v/v MPD, pH 8.5) against 500 uL reservoir, prepared at 277K, incubated at 281K for 96 hours, stored at 277K, rhomboid-shaped crystals appeared after 6 days and grew to a final size of 0.5 x 0.2 x 0.2 mm

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon