4GCI
Crystal structure of glutahtione s-transferase homolog from yersinia pestis, target EFI-501894, with bound glutathione, monoclinic form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-20 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.9793 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 48.741, 89.338, 57.546 |
Unit cell angles | 90.00, 112.26, 90.00 |
Refinement procedure
Resolution | 22.873 - 1.500 |
R-factor | 0.1772 |
Rwork | 0.176 |
R-free | 0.20770 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4g9h |
RMSD bond length | 0.005 |
RMSD bond angle | 1.038 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 53.257 | 22.873 | 1.580 |
High resolution limit [Å] | 1.500 | 4.740 | 1.500 |
Rmerge | 0.041 | 0.577 | |
Total number of observations | 8458 | 39464 | |
Number of reflections | 72798 | ||
<I/σ(I)> | 8.1 | 13 | 1.3 |
Completeness [%] | 99.9 | 96.3 | 100 |
Redundancy | 3.8 | 3.7 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | sitting drop vapor diffuction | 5.5 | 298 | Protein (10 mM Hepes pH 7.5, 100 mM NaCl); Reservoir (0.2 M Ammonium Acetate, 0.1 M Bis-Tris:HCl pH 5.5, 25% (w/v) PEG 3350); Cryoprotection (Reservoir, + 20% ethylene glycol), sitting drop vapor diffuction, temperature 298K |