Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3ZVK

Crystal structure of VapBC2 from Rickettsia felis bound to a DNA fragment from their promoter

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2009-02-26
DetectorADSC CCD
Spacegroup nameP 21 21 21
Unit cell lengths80.780, 92.333, 150.495
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution36.420 - 2.500
R-factor0.1745
Rwork0.172
R-free0.21720
Structure solution methodSIRAS
Starting model (for MR)NONE
RMSD bond length0.010
RMSD bond angle1.280
Data reduction softwareXDS
Data scaling softwareSCALA
Phasing softwareSHARP
Refinement softwareBUSTER (2.9.5)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]47.2902.650
High resolution limit [Å]2.5002.500
Rmerge0.0700.560
Number of reflections39577
<I/σ(I)>17.43.2
Completeness [%]99.799.7
Redundancy4.94.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.512% PEG4000, 4% PEG400, 100MM MES PH6.5
16.512% PEG4000, 4% PEG400, 100MM MES PH6.5

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon