3WNR
Multiple binding modes of benzyl isothiocyanate inhibitor complexed with Macrophage Migration Inhibitory Factor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-04-02 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 68.480, 68.640, 86.470 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.235 - 2.008 |
R-factor | 0.1524 |
Rwork | 0.150 |
R-free | 0.20010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f2k |
RMSD bond length | 0.008 |
RMSD bond angle | 1.016 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER (2.5.2) |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.235 | 43.235 | 2.120 |
High resolution limit [Å] | 2.008 | 6.350 | 2.010 |
Rmerge | 0.043 | 0.419 | |
Rpim | 0.018 | 0.171 | |
Total number of observations | 6713 | 26720 | |
Number of reflections | 55686 | ||
<I/σ(I)> | 13.8 | 27.8 | 4.5 |
Completeness [%] | 99.8 | 99.7 | 99.5 |
Redundancy | 7.3 | 6.7 | 6.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 1.9M ammonium sulfate, 100mM Tris pH 8.0, 200mM NaCl, 4%(v/v) 2-propanol, VAPOR DIFFUSION, HANGING DROP, temperature 298K |