Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3WNR

Multiple binding modes of benzyl isothiocyanate inhibitor complexed with Macrophage Migration Inhibitory Factor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-04-02
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths68.480, 68.640, 86.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.235 - 2.008
R-factor0.1524
Rwork0.150
R-free0.20010
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4f2k
RMSD bond length0.008
RMSD bond angle1.016
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.21)
Phasing softwarePHASER (2.5.2)
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.23543.2352.120
High resolution limit [Å]2.0086.3502.010
Rmerge0.0430.419
Rpim0.0180.171
Total number of observations671326720
Number of reflections55686
<I/σ(I)>13.827.84.5
Completeness [%]99.899.799.5
Redundancy7.36.76.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52981.9M ammonium sulfate, 100mM Tris pH 8.0, 200mM NaCl, 4%(v/v) 2-propanol, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon