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3WJX

Wild-type orotidine 5'-monophosphate decarboxylase from M. thermoautotrophicus complexed with 6-amino-UMP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL41XU
Synchrotron siteSPring-8
BeamlineBL41XU
Temperature [K]100
Detector technologyCCD
DetectorRAYONIX MX-225
Wavelength(s)1.000
Spacegroup nameC 2 2 21
Unit cell lengths57.885, 103.351, 73.579
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.990 - 1.230
R-factor0.1564
Rwork0.156
R-free0.16360
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)3wk3
RMSD bond length0.008
RMSD bond angle1.475
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareREFMAC (5)
Refinement softwareREFMAC (5.7.0029)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.250
High resolution limit [Å]1.2301.230
Rmerge0.0600.293
Number of reflections64324
<I/σ(I)>33.87
Completeness [%]100.0100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.5293Sodium citrate, pH 6.5, VAPOR DIFFUSION, temperature 293K

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PDB entries from 2024-05-15

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