3UAN
Crystal structure of 3-O-sulfotransferase (3-OST-1) with bound PAP and heptasaccharide substrate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 93 |
Detector technology | IMAGE PLATE |
Collection date | 2011-03-12 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 52.883, 62.168, 86.373 |
Unit cell angles | 90.00, 95.16, 90.00 |
Refinement procedure
Resolution | 24.570 - 1.844 |
R-factor | 0.175 |
Rwork | 0.174 |
R-free | 0.20230 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1zrh |
RMSD bond length | 0.004 |
RMSD bond angle | 0.838 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP (Suite) |
Refinement software | PHENIX ((phenix.refine: 1.7_650)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 1.880 |
High resolution limit [Å] | 1.844 | 1.844 |
Number of reflections | 44993 | |
<I/σ(I)> | 21.8 | 3.11 |
Completeness [%] | 97.0 | 84.6 |
Redundancy | 3.7 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5.5 | 293 | Crystals of the 3-OST-1/PAP/heptasaccharide complex were obtained using micro-batch technique, by mixing 1.5 mL of the complex (12.9 mg/mL 3-OST-1, 5 mM heptasaccharide, 4 mM PAP, 23.6 mM Tris pH 7.5, 142 mM NaCl) was mixed with 2.5 mL of 0.1 M sodium citrate pH 5.5 and 20% PEG 3000. Crystals grew to a usable size after 10 days incubation at room temperature. The crystals were transferred in two steps to a cryoprotectant solution containing 0.1 M sodium citrate pH 5.5, 0.1 M NaCl, 4 mM PAP, 20 mM heptasaccharide, 30% PEG3000, and 7.6% ethylene glycol. , temperature 293K |