Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3QYP

Crystal structure of pyrophosphatase from bacteroides thetaiotaomicron, glu47asn mutant complexed with calcium and phosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]90
Detector technologyCCD
Collection date2009-11-10
DetectorADSC QUANTUM 315
Spacegroup nameP 1 21 1
Unit cell lengths42.936, 77.182, 70.803
Unit cell angles90.00, 90.21, 90.00
Refinement procedure
Resolution50.000 - 1.600
R-factor0.18581
Rwork0.185
R-free0.21707
Structure solution methodMR
Starting model (for MR)3qu2
RMSD bond length0.012
RMSD bond angle1.343
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.630
High resolution limit [Å]1.6001.600
Rmerge0.800
Number of reflections61148
<I/σ(I)>9.51
Completeness [%]95.369
Redundancy3.92.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP60.1M MES, PH 6.0, 20% PEG8000, 200MM CALCIUM ACETATE, 5MM MAGNESIUM CHLORIDE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K

220472

PDB entries from 2024-05-29

PDB statisticsPDBj update infoContact PDBjnumon