3O9A
Crystal Structure of wild-type HIV-1 Protease in complex with kd14
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-06-24 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.745, 57.751, 61.876 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.220 - 1.900 |
R-factor | 0.18106 |
Rwork | 0.179 |
R-free | 0.21551 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | ? |
RMSD bond length | 0.009 |
RMSD bond angle | 1.273 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.970 |
High resolution limit [Å] | 1.900 | 4.090 | 1.900 |
Rmerge | 0.088 | 0.056 | 0.387 |
Number of reflections | 14888 | ||
<I/σ(I)> | 10.2 | ||
Completeness [%] | 99.9 | 99.5 | 99.9 |
Redundancy | 6.8 | 6.7 | 6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | hanging drop, vapor diffusion | 6.2 | 295 | 126mM Phosphate buffer pH 6.2, 63mM Sodium Citrate, 24-29% Ammonium Sulfate, hanging drop, vapor diffusion, temperature 295K |