3M9E
Thyroid hormone beta DNA binding domain homodimer with inverted palindrome TRE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Detector technology | CCD |
Collection date | 2009-02-02 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.738, 83.468, 75.743 |
Unit cell angles | 90.00, 98.28, 90.00 |
Refinement procedure
Resolution | 42.182 - 2.406 |
R-factor | 0.1819 |
Rwork | 0.179 |
R-free | 0.23080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nll |
RMSD bond length | 0.010 |
RMSD bond angle | 1.308 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.6_289)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.200 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 34766 | |
<I/σ(I)> | 27.1 | |
Completeness [%] | 98.1 | 92.1 |
Redundancy | 6.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 277 | 20% PEG 3350, 0.2M ammonium sulfate, 0.05M Bis-Tris, 5mM MgCl2, 2uM ZnCl2, pH 6.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K |