3LOV
Crystal structure of Putative protoporphyrinogen oxidase (YP_001813199.1) from Exiguobacterium sp. 255-15 at 2.06 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-12-03 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97894,0.91837,0.97916 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 74.542, 74.542, 212.559 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.270 - 2.060 |
R-factor | 0.199 |
Rwork | 0.197 |
R-free | 0.24100 |
Structure solution method | MAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.566 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.5.0102) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.270 | 43.270 | 2.130 |
High resolution limit [Å] | 2.060 | 4.420 | 2.060 |
Rmerge | 0.126 | 0.044 | 1.040 |
Number of reflections | 37840 | 4168 | 3374 |
<I/σ(I)> | 12.9 | 36.8 | 1.8 |
Completeness [%] | 99.4 | 99.5 | 95.1 |
Redundancy | 7.08 | 6.45 | 6.45 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 277 | 0.2000M sodium acetate, 30.0000% polyethylene glycol 4000, 0.1M TRIS pH 8.5, Additive: 0.003 M flavin adenine dinucleotide (FAD), 0.003 M nicotinamide adenine dinucleotide (NAD), NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |