3IJK
5-OMe modified DNA 8mer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X12C |
Synchrotron site | NSLS |
Beamline | X12C |
Temperature [K] | 99 |
Detector technology | CCD |
Collection date | 2009-07-14 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.9795 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 43.210, 43.210, 23.692 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.560 - 1.300 |
Rwork | 0.197 |
R-free | 0.21884 |
Structure solution method | SAD |
Starting model (for MR) | 1dns |
RMSD bond length | 0.006 |
RMSD bond angle | 1.600 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | SHELXS |
Refinement software | REFMAC (5.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.037 | 0.682 |
Number of reflections | 5561 | |
<I/σ(I)> | 38.35 | 1 |
Completeness [%] | 94.5 | 50.8 |
Redundancy | 12.7 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6 | 293 | 10% v / v MPD, 40 mM Na Cacodylate pH 6.0, 12 mM Spermine tetra-HCl, 80 mM Strontium Chloride, VAPOR DIFFUSION, HANGING DROP, temperature 293K |