3HKM
Crystal Structure of rice(Oryza sativa) Rrp46
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13C1 |
Synchrotron site | NSRRC |
Beamline | BL13C1 |
Temperature [K] | 113 |
Detector technology | IMAGE PLATE |
Collection date | 2008-06-15 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.0 |
Spacegroup name | P 31 |
Unit cell lengths | 111.607, 111.607, 57.702 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 26.807 - 1.984 |
R-factor | 0.1727 |
Rwork | 0.169 |
R-free | 0.23460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2NN6 chain D |
RMSD bond length | 0.006 |
RMSD bond angle | 1.090 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | AMoRE |
Refinement software | PHENIX ((phenix.refine)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.070 |
High resolution limit [Å] | 1.980 | 1.980 |
Rmerge | 0.057 | 0.381 |
Total number of observations | 185470 | |
Number of reflections | 55506 | |
<I/σ(I)> | 21.65 | 3.15 |
Completeness [%] | 100.0 | 100 |
Redundancy | 3.34 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | 0.2M sodium malonate, 20% PEG 3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |