3CSV
Crystal structure of a putative aminoglycoside phosphotransferase (YP_614837.1) from Silicibacter sp. TM1040 at 2.15 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2008-03-17 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 0.97915 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.680, 55.940, 61.220 |
Unit cell angles | 90.00, 102.90, 90.00 |
Refinement procedure
Resolution | 29.735 - 2.150 |
R-factor | 0.171 |
Rwork | 0.168 |
R-free | 0.22800 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.174 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0019) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.735 | 29.735 | 2.230 |
High resolution limit [Å] | 2.150 | 4.610 | 2.150 |
Rmerge | 0.055 | 0.026 | 0.322 |
Number of reflections | 20496 | 3938 | 4013 |
<I/σ(I)> | 10.33 | 24.1 | 2.4 |
Completeness [%] | 98.2 | 97.4 | 96.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | NANODROP, 2.0M (NH4)2SO4, 0.2M NaCl, 0.1M Cacodylate pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K |