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378D

STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsMACSCIENCE
Temperature [K]293
Detector technologyAREA DETECTOR
DetectorSIEMENS-NICOLET
Spacegroup nameP 1 21 1
Unit cell lengths29.550, 42.180, 43.380
Unit cell angles90.00, 96.56, 90.00
Refinement procedure
Resolution8.000 - 2.400
R-factor0.21
Rwork0.210
R-free0.28600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)COORDINATES OF D(CCCCCIIIII) (FROM CRYSTAL STRUCTURE)
RMSD bond length0.004

*

RMSD bond angle1.090

*

Data reduction softwareXENGEN (V. 2.1)
Phasing softwareAMoRE
Refinement softwareX-PLOR
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]26.7002.510
High resolution limit [Å]2.2302.400
Rmerge0.070
Number of reflections3588

*

Completeness [%]84.7

*

53.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7293

*

pH 7.00
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropDNA1 (mM)
21dropdistamycin A hydrochloride1 (mM)
31dropmagnesium chloride20 (mM)
41reservoirMPD40 (%)

218853

PDB entries from 2024-04-24

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