2YWZ
Structure of new antigen receptor variable domain from sharks
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 113 |
Detector technology | IMAGE PLATE |
Collection date | 2004-08-20 |
Detector | MAR scanner 180 mm plate |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 58.252, 50.442, 46.731 |
Unit cell angles | 90.00, 104.43, 90.00 |
Refinement procedure
Resolution | 18.110 - 2.210 |
R-factor | 0.18853 |
Rwork | 0.185 |
R-free | 0.25370 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ves |
RMSD bond length | 0.011 |
RMSD bond angle | 1.593 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.110 | 2.250 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.008 | 0.550 |
Number of reflections | 6619 | |
<I/σ(I)> | 21 | 2.8 |
Completeness [%] | 99.2 | 99.2 |
Redundancy | 7.2 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 298 | 0.1M CACODYLATE, 36% MPEG 2000, pH 6.50, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K |