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2V6G

Structure of Progesterone 5beta-Reductase from Digitalis Lanata in complex with NADP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsBESSY BEAMLINE 14.1
Synchrotron siteBESSY
Beamline14.1
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Spacegroup nameP 43 21 2
Unit cell lengths78.590, 78.590, 178.100
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.340 - 2.300
R-factor0.175
Rwork0.171
R-free0.21200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)NADP FREE STRUCTURE
RMSD bond length0.012
RMSD bond angle1.343
Data reduction softwareXDS
Data scaling softwareXSCALE
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.400
High resolution limit [Å]2.3002.300
Rmerge0.0800.740
Number of reflections25629
<I/σ(I)>264.6
Completeness [%]99.9100
Redundancy14.314.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
15.8CONTAINERLESS BATCH METHOD: 300 MICROL OF HIGH-DENSITY SILICON OIL WAS TRANSFERRED INTO A WELL OF A CELL CULTURE PLATE AND OVER-LAID WITH 500 MICROL OF REGULAR SILICON OIL. AT THE INTERFACE BETWEEN THE TWO LIQUIDS A DROPLET WAS DEPOSITED THAT WAS OBTAINED BY MIXING 0.4 MICROL OF H2O, 2.2 MICROL OF 5BETA-POR SOLUTION WITH NADP AND PROGESTERONE ADDED AND 1.8 MICROL OF A CRYSTALLIZATION SOLUTION CONSISTING OF 22.9 % MPD, 3.5 % PEG 8000, 0.05 M SODIUM ACETATE, 0.02 M CACL2, PH 5.8.

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