2R0C
Structure of the substrate-free form of the rebeccamycin biosynthetic enzyme REBC
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-07-09 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.8455, 1.8447, 0.9798 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.220, 77.562, 64.673 |
Unit cell angles | 90.00, 108.04, 90.00 |
Refinement procedure
Resolution | 50.000 - 1.800 |
R-factor | 0.211 |
Rwork | 0.211 |
R-free | 0.24100 |
Structure solution method | MAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.280 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Number of reflections | 52005 | |
<I/σ(I)> | 25.4 | 2.6 |
Completeness [%] | 93.9 | 67.2 |
Redundancy | 7.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | 7.4 | 298 | 1.5 microliters of RebC (9 mg/mL in 150 mM NaCl, 10% glycerol, 25 mM HEPES pH 7.5) were incubated with 0.35 microliters of guanidine-HCl for 30 seconds, followed by addition of 1.5 microliters of precipitant solution (19% PEG-8000, 0.1 M HEPES pH 7.4), without mixing, at room temperature and sealed over a precipitant well solution. Immediately after set up, crystal trays were placed on a gel shaker and then, after 12 hours, transferred to a storage space in vibration-isolation. Before being flash-frozen in liquid nitrogen, a crystal was soaked for five seconds in cryogenic solution (19% PEG-8000, 0.1 M HEPES pH 7.4, 20% glycerol), VAPOR DIFFUSION, HANGING DROP, temperature 298K, pH 7.40 |