Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2ICX

Crystal Structure of a Putative UDP-glucose Pyrophosphorylase from Arabidopsis Thaliana with Bound UTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsBRUKER AXS MICROSTAR
Temperature [K]100
Detector technologyCCD
Collection date2006-05-02
DetectorBRUKER PROTEUM-R
Wavelength(s)1.5418
Spacegroup nameC 1 2 1
Unit cell lengths187.683, 59.679, 89.813
Unit cell angles90.00, 100.38, 90.00
Refinement procedure
Resolution70.481 - 1.850
R-factor0.195
Rwork0.192
R-free0.23900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1z90
RMSD bond length0.016
RMSD bond angle1.902
Data reduction softwareSAINT
Data scaling softwareSAINT
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]70.48170.4811.900
High resolution limit [Å]1.8505.0501.850
Rmerge0.0350.0140.311
Number of reflections83235
<I/σ(I)>23.972.843.19
Completeness [%]99.498.1100
Redundancy14.35.09
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1vapor diffusion, hanging drop with micro-seeding273Protein solution (10 mg/ml protein, 0.050 M sodium chloride, 0.0003 M TCEP, 0.005 M Tris PH 8.0) mixed in a 1:1 ratio with Well solution ( 28 % PEG 2K, 5% DMSO, 0.10 M MES/Acetate pH 5.5), crystals soaked in well solution supplemented with 0.002 M UTP, vapor diffusion, hanging drop with micro-seeding, temperature 273K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon