Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2HD9

Crystal structure of PH1033 from Pyrococcus horikoshii OT3

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B1
Synchrotron siteSPring-8
BeamlineBL26B1
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2005-06-28
DetectorRIGAKU RAXIS V
Wavelength(s)1.0000
Spacegroup nameP 32 2 1
Unit cell lengths39.891, 39.891, 168.481
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution31.960 - 1.350
R-factor0.228
Rwork0.228
R-free0.23400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1wmm
RMSD bond length0.008
RMSD bond angle1.500
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.400
High resolution limit [Å]1.3501.350
Rmerge0.1260.663
Number of reflections35514
<I/σ(I)>6.73.2
Completeness [%]100.0100
Redundancy9.99.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH5.7295PEG4000, citrate, glycerol, molecular sieves 5A, pH 5.7, microbatch, temperature 295K

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon