Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YPQ

Human Oxidized Low Density Lipoprotein Receptor LOX-1 Dioxane Complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2004-04-12
DetectorMARMOSAIC 225 mm CCD
Spacegroup nameC 1 2 1
Unit cell lengths70.700, 49.100, 76.300
Unit cell angles90.00, 98.50, 90.00
Refinement procedure
Resolution9.960 - 1.400
R-factor0.177
Rwork0.177
R-free0.19200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1mpu 1k9i 1q03
RMSD bond length0.010
RMSD bond angle1.600
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.450
High resolution limit [Å]1.4001.400
Rmerge0.270
Number of reflections50675
<I/σ(I)>252.4
Completeness [%]99.091.8
Redundancy4.11.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
19277PEG10K, Bicine, Dioxane, HEPES, NaCl, pH 9.0, VAPOR DIFFUSION, HANGING DROP, temperature 277K

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon