1VJV
Crystal structure of Ubiquitin carboxyl-terminal hydrolase 6 (yfr010w) from Saccharomyces cerevisiae at 1.74 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-07-25 |
Detector | ADSC |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.231, 79.449, 106.339 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 63.650 - 1.740 |
R-factor | 0.18069 |
Rwork | 0.179 |
R-free | 0.20892 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.304 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (4.2)) |
Phasing software | SHELXD |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.450 | 1.790 |
High resolution limit [Å] | 1.740 | 1.740 |
Rmerge | 0.052 | 0.594 |
Number of reflections | 42823 | |
<I/σ(I)> | 15.3 | 2.1 |
Completeness [%] | 98.2 | 89.8 |
Redundancy | 4 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 277 | 16% PEG MME 2000, 0.03M Tris_base, 0.07M Tris Cl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K | |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 277 | 16% PEG MME 2000, 0.03M Tris_base, 0.07M Tris Cl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K | |
1 | VAPOR DIFFUSION,SITTING DROP,NANODROP | 277 | 16% PEG MME 2000, 0.03M Tris_base, 0.07M Tris Cl , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K |