Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1V6I

Peanut lectin-lactose complex in acidic pH

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]293
Detector technologyIMAGE PLATE
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 21 21 2
Unit cell lengths128.609, 125.749, 76.049
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.150
Rwork0.184
R-free0.21800
Structure solution methodIsomorphous replacement
Starting model (for MR)2pel
RMSD bond length0.005
RMSD bond angle26.400

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.170
High resolution limit [Å]2.1502.150
Rmerge0.1310.575
Total number of observations391685

*

Number of reflections676013325

*

Completeness [%]99.9

*

100

*

Redundancy5.85.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

4.6293PEG 8000, 0.2M calcium acetate, 0.1M cacodylate pH 6.5, pH 4.6, hanging drop method, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein4.2 (mg/ml)
21dropsodium acetate0.05 (M)
31drop0.2 (M)
41dropsodium azide0.05 (%)
51droplactose2.1 (mM)
61reservoirPEG800012 (%)

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon