1NHZ
Crystal Structure of the Antagonist Form of Glucocorticoid Receptor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-02-26 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 74.859, 109.764, 39.261 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 * - 2.300 |
R-factor | 0.20787 |
Rwork | 0.204 |
R-free | 0.26300 * |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.018 |
RMSD bond angle | 1.797 |
Data reduction software | MOSFLM |
Data scaling software | SCALA |
Phasing software | MOLREP |
Refinement software | REFMAC (5.1.19) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 * | 2.420 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.106 * | 0.348 * |
Number of reflections | 14815 | |
<I/σ(I)> | 8.8 | 6.1 |
Completeness [%] | 98.1 * | 98 * |
Redundancy | 3.5 | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 * | 12 * | PEG 8000, 1, 6-hexanediol, NaSCN, Tris-HCl, pH 8.2, VAPOR DIFFUSION, HANGING DROP, temperature 288K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | PEG8000 | 15 (%) | |
2 | 1 | reservoir | 1,6-hexanediol | 900 (mM) | |
3 | 1 | reservoir | 600 (mM) | ||
4 | 1 | reservoir | Tris-HCl | 100 (mM) | pH8.2 |
5 | 1 | drop | Tris-HCl | 10 (mM) | pH8.5 |
6 | 1 | drop | dithiothreitol | 2.5 (mM) | |
7 | 1 | drop | RU-486 | 50000 (nM) | |
8 | 1 | drop | protein | 5-12 (mg/ml) |