1LW1
Crystal Structure Of Mycobacterium Tuberculosis Alkylperoxidase Ahpd H137F mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SRS BEAMLINE PX9.6 |
Synchrotron site | SRS |
Beamline | PX9.6 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2002-04-16 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.87 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 96.603, 62.184, 89.481 |
Unit cell angles | 90.00, 121.81, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.300 |
R-factor | 0.19 |
Rwork | 0.184 |
R-free | 0.28600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1gu9 |
RMSD bond length | 0.008 |
RMSD bond angle | 18.830 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS (1.1) |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.110 | 0.240 |
Total number of observations | 396017 * | |
Number of reflections | 18396 | |
<I/σ(I)> | 9.188 | 2.94 |
Completeness [%] | 92.5 | 70.3 |
Redundancy | 3.42 | 3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.2 * | 290 | 100MM SODIUM CITRATE BUFFER, PH 5.6, CONTAINING 200MM AMMONIUM ACETATE AND 26% PEG 4000. MIXED IN EQUAL VOLUME WITH AHPD (4.5 MG/ML) IN 25MM MOPS BUFFER, PH 7.2, CONTAINING 50MM KCL, 10% GLYCEROL, 0.1MM EDTA, VAPOR DIFFUSION, HANGING DROP, temperature 290.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 4.5 (mg/ml) | |
2 | 1 | drop | MOPS | 25 (mM) | pH7.2 |
3 | 1 | drop | 50 (mM) | ||
4 | 1 | drop | glycerol | 10 (%) | |
5 | 1 | drop | EDTA | 0.1 (mM) | |
6 | 1 | drop | dithiothreitol | 5.0 (mM) | |
7 | 1 | reservoir | sodium citrate | 100 (mM) | pH5.6 |
8 | 1 | reservoir | ammonium acetate | 200 (mM) | |
9 | 1 | reservoir | PEG4000 | 26 (%) |