1KSD
The structure of Endoglucanase from termite, Nasutitermes takasagoensis, at pH 6.5.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 120 |
Detector technology | IMAGE PLATE |
Collection date | 2000-06-01 |
Detector | MAC Science DIP-2030K |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 89.251, 83.924, 60.878 |
Unit cell angles | 90.00, 95.47, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.600 |
Rwork | 0.170 |
R-free | 0.20100 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tf4 |
RMSD bond length | 0.005 |
RMSD bond angle | 1.210 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.660 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.089 | 0.509 |
Total number of observations | 654717 * | |
Number of reflections | 57195 | |
<I/σ(I)> | 19.6 | 3.6 |
Completeness [%] | 97.0 | 92.4 |
Redundancy | 19.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.5 * | 291 | Ammonium Sulfate, Sodium Citrate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K, pH 6.5 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 8 (mg/ml) | |
2 | 1 | drop | protein | 0.1 (M) | pH4.5 |
3 | 1 | drop | ammonium sulfate | 0.8 (M) |