1KR7
Crystal structure of the nerve tissue mini-hemoglobin from the nemertean worm Cerebratulus lacteus
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID29 |
Synchrotron site | ESRF |
Beamline | ID29 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2001-06-23 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.739, 1.740, 0.915 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.721, 43.173, 60.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.000 * - 1.500 |
R-factor | 0.153 * |
Rwork | 0.153 |
R-free | 0.18702 |
Structure solution method | MAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.140 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 35.000 | 1.530 |
High resolution limit [Å] | 1.500 | 1.500 |
Rmerge | 0.054 | 0.239 |
Total number of observations | 67606 * | |
Number of reflections | 17906 | |
<I/σ(I)> | 14.3 | 3.2 |
Completeness [%] | 97.1 | 95.7 |
Redundancy | 3.8 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 5.5 | 4 * | ammonium sulfate, sodium acetate, pH 5.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 27 (mg/ml) | |
2 | 1 | reservoir | ammonium sulfate | 60 (%) | |
3 | 1 | reservoir | sodium acetate | 50 (mM) | pH5.5 |