1JRG
Crystal Structure of the R3 form of Pectate Lyase A, Erwinia chrysanthemi
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 153 |
Detector technology | IMAGE PLATE |
Collection date | 2000-04-12 |
Detector | MARRESEARCH |
Wavelength(s) | 1.5418 |
Spacegroup name | H 3 |
Unit cell lengths | 98.055, 98.055, 217.162 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 50.000 - 2.100 |
R-factor | 0.16 |
Rwork | 0.160 |
R-free | 0.21090 * |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PelE search model comprised of residues 30-61 70-100 105-251 258-280 293-314 and 323-332. (Coordinates provided by F. Jurnak) |
RMSD bond length | 0.007 |
RMSD bond angle | 1.418 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.077 * | 0.310 * |
Total number of observations | 111710 * | |
Number of reflections | 44138 * | |
<I/σ(I)> | 12 | 3.5 |
Completeness [%] | 98.3 * | 99.8 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, sitting drop * | 7 | 295 | PEG 8K, PEG1K, HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 295K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | HEPES | 10 (mM) | pH7.0 |
2 | 1 | drop | 0.5 (M) | ||
3 | 1 | drop | PEG8000 | 1 (%) | |
4 | 1 | reservoir | 1 (M) | ||
5 | 1 | reservoir | PEG8000 | 2 (%) |