1DD6
IMP-1 METALLO BETA-LACTAMASE FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH A MERCAPTOCARBOXYLATE INHIBITOR
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU300 |
Temperature [K] | 298 |
Detector technology | IMAGE PLATE |
Collection date | 1997-04-21 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 49.300, 51.200, 203.300 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 2.000 |
R-factor | 0.198 |
Rwork | 0.198 |
R-free | 0.25900 |
RMSD bond length | 0.018 |
RMSD bond angle | 2.000 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.103 | 0.314 |
Total number of observations | 545270 * | |
Number of reflections | 34187 * | |
<I/σ(I)> | 21 | |
Completeness [%] | 95.9 * | 97.6 |
Redundancy | 16 | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 * | 293 | SITTING DROPS WERE PREPARED BY MIXING EQUAL VOLUMES OF PROTEIN WHICH WAS 14 MG/ ML IN 20MM HEPES, PH 7.5 AND TO WHICH AN EXCESS OF SOLID INHIBITOR HAD BEEN ADDED AND RESERVOIR SOLUTION (30% PEG 2000 MONOMETHYLETHER, 0.1M SODIUM ACETATE, PH 5.0 AND 0.2M AMMONIUM SULFATE). THIS MIXTURE WAS INCUBATED OVERNIGHT AT 4C AND CENTRIFUGED TO REMOVE PRECIPITATE BEFORE SETTING UP CRYSTALLIZATION DROPS. CO-CRYSTALS WERE GROWN FROM 6 ML SITTING DROPS OF THE PROTEIN-RESERVOIR SOLUTION AND 0.3 ML OF THE RESERVOIR SOLUTION AT EITHER ROOM TEMPERATURE OR 4C, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 * | 293 | SITTING DROPS WERE PREPARED BY MIXING EQUAL VOLUMES OF PROTEIN WHICH WAS 14 MG/ ML IN 20MM HEPES, PH 7.5 AND TO WHICH AN EXCESS OF SOLID INHIBITOR HAD BEEN ADDED AND RESERVOIR SOLUTION (30% PEG 2000 MONOMETHYLETHER, 0.1M SODIUM ACETATE, PH 5.0 AND 0.2M AMMONIUM SULFATE). THIS MIXTURE WAS INCUBATED OVERNIGHT AT 4C AND CENTRIFUGED TO REMOVE PRECIPITATE BEFORE SETTING UP CRYSTALLIZATION DROPS. CO-CRYSTALS WERE GROWN FROM 6 ML SITTING DROPS OF THE PROTEIN-RESERVOIR SOLUTION AND 0.3 ML OF THE RESERVOIR SOLUTION AT EITHER ROOM TEMPERATURE OR 4C, pH 6.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 14 (mg/ml) | |
2 | 1 | drop | HEPES | 20 (mM) | pH7.5 |
3 | 1 | reservoir | PEG MME2000 | 30 (%) | |
4 | 1 | reservoir | sodium acetate | 0.1 (M) | pH5.6 |
5 | 1 | reservoir | ammonium sulfate | 0.2 (M) |