Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1D89

A DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BEND

Experimental procedure
Temperature [K]263
Detector technologyAREA DETECTOR
DetectorUCSD MARK II
Spacegroup nameP 21 21 2
Unit cell lengths44.780, 66.050, 42.910
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution6.000 - 2.300
R-factor0.232
Rwork0.232
RMSD bond length0.012
RMSD bond angle3.200
Refinement softwareX-PLOR
Data quality characteristics
 Overall
High resolution limit [Å]2.300
Rmerge0.051

*

Total number of observations24066

*

Number of reflections5545
Completeness [%]92.0

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP710

*

pH 7.00, VAPOR DIFFUSION, SITTING DROP, temperature 283.00K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111WATER
211MPD
311MGCL2
411NA CACODYLATE
511SPERMINE
612WATER
712MPD
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropduplex5 (mg/ml)
21reservoir93 (mM)
31reservoirsodium cacodylate10 (mM)
41reservoirspermine tetrahydrochloride1 (mM)
51reservoirMPD31 (%)

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon