1D3T
CRYSTAL STRUCTURE OF HUMAN ALPHA THROMBIN IN COMPLEX WITH BENZO[B]THIOPHENE INHIBITOR 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 295 |
Detector technology | IMAGE PLATE |
Collection date | 1996-01-01 |
Detector | RIGAKU RAXIS IIC |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 71.140, 71.850, 72.960 |
Unit cell angles | 90.00, 100.50, 90.00 |
Refinement procedure
Resolution | 20.000 - 3.000 |
R-factor | 0.172 |
Rwork | 0.172 |
R-free | 0.23500 |
RMSD bond length | 0.009 |
RMSD bond angle | 27.026 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | X-PLOR |
Refinement software | X-PLOR (98.0) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.050 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 0.084 | 0.257 |
Total number of observations | 24280 * | |
Number of reflections | 5736 | |
<I/σ(I)> | 10.6 | 3.1 |
Completeness [%] | 79.7 | 81.1 * |
Redundancy | 2.1 | 2.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 5.6 | 4 * | 30% PEG 3400; 100 mM sodium citrate; 200 mM ammonium acetate, pH 5.6, VAPOR DIFFUSION, SITTING DROP, temperature 277K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 6 (mg/ml) | |
2 | 1 | reservoir | PEG3400 | 30 (%) | |
3 | 1 | reservoir | sodium citrate | 100 (mM) | |
4 | 1 | reservoir | ammonium acetate | 200 (mM) |