Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1D1Z

CRYSTAL STRUCTURE OF THE XLP PROTEIN SAP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE A1
Synchrotron siteCHESS
BeamlineA1
Temperature [K]100
Detector technologyCCD
DetectorPRINCETON 2K
Spacegroup nameP 1
Unit cell lengths32.480, 62.270, 65.090
Unit cell angles65.71, 78.67, 89.66
Refinement procedure
Resolution10.000 - 1.400
R-factor0.139
Rwork0.139
R-free0.18700
RMSD bond length0.011
RMSD bond angle0.029
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareSHELXL-97
Data quality characteristics
 Overall
Low resolution limit [Å]22.000
High resolution limit [Å]1.400
Rmerge0.062
Total number of observations274082

*

Number of reflections83110
Completeness [%]92.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5

*

2951.64 M AMMONIUM SULFATE, 100 MM SODIUM CITRATE, PH 5.6, AND 10 MM DTT, VAPOR DIFFUSION, HANGING DROP, temperature 22K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20 (mg/ml)
21dropHEPES20 (mM)
31drop150 (mM)
41dropdithiothreitol10 (mM)
51reservoirammonium sulfate1.64 (M)
61reservoirsodium citrate100 (mM)
71reservoirdithiothreitol10 (mM)

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon