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1B1E

CRYSTAL STRUCTURE OF HUMAN ANGIOGENIN VARIANT K40Q

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsSIEMENS
Temperature [K]289
Detector technologyAREA DETECTOR
DetectorSIEMENS
Spacegroup nameC 2 2 21
Unit cell lengths83.660, 120.030, 37.630
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.000
R-factor0.229
Rwork0.229
R-free0.28700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1ang
RMSD bond length0.010
RMSD bond angle28.000

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Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareAMoRE
Refinement softwareX-PLOR (3.851)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.100
High resolution limit [Å]2.0002.000
Rmerge0.0550.248
Total number of observations104187

*

Number of reflections13155
<I/σ(I)>4.91.3
Completeness [%]98.394.9
Redundancy7.92.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

5.216

*

pH 5.2, temperature 289K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111SODIUM CITRATE
211SODIUM POTASIUM TARTARATE
311PEG 4000
412SODIUM CITRATE
512SODIUM POTASIUM TARTARATE
612PEG 4000
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropsodium citrate10 (mM)
31dropsodium potassium tartrate0.1 (M)
41dropPEG60005 (%)
51reservoirsodium citrate20 (mM)
61reservoirsodium potassium tartrate0.2 (M)
71reservoirPEG600010 (%)

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PDB entries from 2024-05-08

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