VOD
Bonds
First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
C2 | C3 | doub | 1.33Å | 1.32Å | |
C3 | C4 | sing | 1.48Å | 1.48Å | |
C4 | C5 | sing | 1.40Å | 1.35Å | Aromatic |
C4 | C9 | doub | 1.39Å | 1.40Å | Aromatic |
C5 | C6 | doub | 1.38Å | 1.38Å | Aromatic |
C6 | C7 | sing | 1.38Å | 1.39Å | Aromatic |
C7 | C8 | doub | 1.38Å | 1.40Å | Aromatic |
C7 | C10 | sing | 1.51Å | 1.51Å | |
C8 | C9 | sing | 1.38Å | 1.39Å | Aromatic |
C10 | S11 | sing | 1.81Å | 1.68Å | |
S11 | O12 | doub | 1.42Å | 1.47Å | |
S11 | O13 | doub | 1.42Å | 1.47Å | |
S11 | O11 | sing | 1.52Å | 1.65Å | |
C2 | H21C | sing | 1.08Å | 1.08Å | |
C2 | H22C | sing | 1.08Å | 1.08Å | |
C3 | H3 | sing | 1.08Å | 1.08Å | |
C5 | H5 | sing | 1.08Å | 1.08Å | |
C9 | H9 | sing | 1.08Å | 1.08Å | |
C6 | H6 | sing | 1.08Å | 1.08Å | |
C8 | H8 | sing | 1.08Å | 1.08Å | |
C10 | H101 | sing | 1.09Å | 1.10Å | |
C10 | H102 | sing | 1.09Å | 1.10Å | |
O11 | H11 | sing | 0.97Å | 0.95Å |
Angles
First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
C2 | C3 | C4 | 122.9° | 120.0° |
C3 | C2 | H21C | 120.0° | 120.0° |
C3 | C2 | H22C | 120.0° | 120.0° |
C2 | C3 | H3 | 118.6° | 120.0° |
C3 | C4 | C5 | 119.1° | 120.1° |
C3 | C4 | C9 | 124.3° | 120.1° |
C4 | C3 | H3 | 118.5° | 120.0° |
C5 | C4 | C9 | 116.5° | 119.8° |
C4 | C5 | C6 | 125.5° | 119.8° |
C4 | C5 | H5 | 117.2° | 120.1° |
C4 | C9 | C8 | 119.6° | 119.8° |
C4 | C9 | H9 | 120.3° | 120.1° |
C5 | C6 | C7 | 118.9° | 120.1° |
C6 | C5 | H5 | 117.2° | 120.1° |
C5 | C6 | H6 | 120.6° | 120.0° |
C6 | C7 | C8 | 117.1° | 120.3° |
C6 | C7 | C10 | 126.1° | 119.9° |
C7 | C6 | H6 | 120.5° | 119.9° |
C8 | C7 | C10 | 116.8° | 119.8° |
C7 | C8 | C9 | 122.4° | 120.1° |
C7 | C8 | H8 | 118.8° | 120.0° |
C7 | C10 | S11 | 116.3° | 109.5° |
C7 | C10 | H101 | 107.7° | 109.5° |
C7 | C10 | H102 | 107.7° | 109.4° |
C8 | C9 | H9 | 120.2° | 120.1° |
C9 | C8 | H8 | 118.9° | 119.9° |
C10 | S11 | O12 | 105.5° | 110.6° |
C10 | S11 | O13 | 125.6° | 110.5° |
C10 | S11 | O11 | 99.9° | 104.4° |
S11 | C10 | H101 | 107.7° | 109.5° |
S11 | C10 | H102 | 107.7° | 109.5° |
O12 | S11 | O13 | 111.4° | 121.0° |
O12 | S11 | O11 | 107.7° | 104.3° |
O13 | S11 | O11 | 105.1° | 104.3° |
S11 | O11 | H11 | 109.5° | 114.0° |
H21C | C2 | H22C | 120.0° | 120.0° |
H101 | C10 | H102 | 109.5° | 109.5° |
Dihedrals
First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
C2 | C3 | C4 | H3 | 180.0° | 180.0° |
C2 | C3 | C4 | C5 | 0.6° | 180.0° |
C2 | C3 | C4 | C9 | 174.6° | 0.3° |
C3 | C2 | H21C | H22C | 180.0° | 179.7° |
C3 | C4 | C5 | C9 | 175.5° | 179.7° |
C3 | C4 | C5 | C6 | 180.0° | 180.0° |
C3 | C4 | C9 | C8 | 178.6° | 179.7° |
C4 | C3 | C2 | H21C | 0.0° | 180.0° |
C4 | C3 | C2 | H22C | 180.0° | 0.3° |
C3 | C4 | C5 | H5 | 0.0° | 0.0° |
C3 | C4 | C9 | H9 | 1.3° | 0.0° |
C4 | C5 | C6 | H5 | 180.0° | 180.0° |
C4 | C5 | C6 | C7 | 2.7° | 0.1° |
C5 | C4 | C9 | C8 | 3.4° | 0.6° |
C5 | C4 | C3 | H3 | 179.4° | 0.0° |
C5 | C4 | C9 | H9 | 176.6° | 179.8° |
C4 | C5 | C6 | H6 | 177.3° | 180.0° |
C9 | C4 | C5 | C6 | 4.5° | 0.3° |
C4 | C9 | C8 | C7 | 0.7° | 0.6° |
C4 | C9 | C8 | H9 | 180.0° | 179.6° |
C9 | C4 | C3 | H3 | 5.4° | 179.7° |
C9 | C4 | C5 | H5 | 175.5° | 179.7° |
C4 | C9 | C8 | H8 | 179.3° | 179.7° |
C5 | C6 | C7 | H6 | 180.0° | 180.0° |
C5 | C6 | C7 | C8 | 0.3° | 0.0° |
C5 | C6 | C7 | C10 | 179.8° | 180.0° |
C6 | C7 | C8 | C10 | 180.0° | 180.0° |
C6 | C7 | C8 | C9 | 1.1° | 0.3° |
C6 | C7 | C10 | S11 | 36.5° | 90.0° |
C7 | C6 | C5 | H5 | 177.3° | 180.0° |
C6 | C7 | C8 | H8 | 178.9° | 180.0° |
C6 | C7 | C10 | H101 | 84.5° | 150.0° |
C6 | C7 | C10 | H102 | 157.5° | 30.0° |
C7 | C8 | C9 | H8 | 180.0° | 179.7° |
C8 | C7 | C10 | S11 | 143.5° | 90.0° |
C7 | C8 | C9 | H9 | 179.3° | 179.8° |
C8 | C7 | C6 | H6 | 179.7° | 180.0° |
C8 | C7 | C10 | H101 | 95.5° | 30.0° |
C8 | C7 | C10 | H102 | 22.5° | 150.0° |
C10 | C7 | C8 | C9 | 178.9° | 179.7° |
C7 | C10 | S11 | H101 | 121.0° | 120.0° |
C7 | C10 | S11 | H102 | 121.0° | 119.9° |
C7 | C10 | S11 | O12 | 178.2° | 68.4° |
C7 | C10 | S11 | O13 | 46.5° | 68.4° |
C7 | C10 | S11 | O11 | 70.2° | 180.0° |
C10 | C7 | C6 | H6 | 0.2° | 0.0° |
C10 | C7 | C8 | H8 | 1.1° | 0.0° |
C7 | C10 | H101 | H102 | 116.9° | 120.0° |
C10 | S11 | O12 | O13 | 139.2° | 131.5° |
C10 | S11 | O12 | O11 | 106.0° | 111.7° |
C10 | S11 | O13 | O11 | 114.3° | 111.7° |
S11 | C10 | H101 | H102 | 116.9° | 120.1° |
C10 | S11 | O11 | H11 | 131.2° | 180.0° |
O12 | S11 | O13 | O11 | 116.4° | 116.8° |
O12 | S11 | C10 | H101 | 60.9° | 171.6° |
O12 | S11 | C10 | H102 | 57.2° | 51.6° |
O12 | S11 | O11 | H11 | 118.9° | 63.9° |
O13 | S11 | C10 | H101 | 167.5° | 51.6° |
O13 | S11 | C10 | H102 | 74.5° | 171.7° |
O13 | S11 | O11 | H11 | 0.0° | 63.9° |
O11 | S11 | C10 | H101 | 50.7° | 60.0° |
O11 | S11 | C10 | H102 | 168.8° | 60.0° |
H21C | C2 | C3 | H3 | 180.0° | 0.0° |
H22C | C2 | C3 | H3 | 0.0° | 179.7° |
H5 | C5 | C6 | H6 | 2.7° | 0.0° |
H9 | C9 | C8 | H8 | 0.7° | 0.0° |