UGY
Bonds
| First atom | Second atom | Bond order type | Distance (experimental model) | Distance (ideal model) | Properties |
| O | C | doub | 1.21Å | 1.32Å | |
| OXT | C | sing | 1.34Å | 1.21Å | |
| C | CA | sing | 1.51Å | 1.50Å | |
| N | CA | sing | 1.47Å | 1.45Å | |
| CA | NB | sing | 1.46Å | 1.47Å | |
| NB | CG | sing | 1.35Å | 1.35Å | |
| CG | NE | sing | 1.35Å | 1.34Å | |
| CG | OE | doub | 1.22Å | 1.23Å | |
| OXT | HXT | sing | 0.97Å | 0.95Å | |
| CA | HA | sing | 1.09Å | 1.10Å | |
| N | H | sing | 1.01Å | 1.00Å | |
| N | H2 | sing | 1.01Å | 1.00Å | |
| NB | H6 | sing | 0.97Å | 1.00Å | |
| NE | H7 | sing | 0.97Å | 1.00Å | |
| NE | H8 | sing | 0.97Å | 1.00Å |
Angles
| First atom | Second atom | Third atom | Angle (experimental model) | Angle (ideal model) |
| O | C | OXT | 118.7° | 120.0° |
| O | C | CA | 121.1° | 120.0° |
| OXT | C | CA | 120.2° | 120.0° |
| C | OXT | HXT | 109.5° | 117.0° |
| C | CA | N | 108.0° | 109.5° |
| C | CA | NB | 112.7° | 109.5° |
| C | CA | HA | 108.8° | 109.5° |
| N | CA | NB | 108.5° | 109.5° |
| N | CA | HA | 109.5° | 109.4° |
| CA | N | H | 109.5° | 111.0° |
| CA | N | H2 | 109.5° | 111.0° |
| CA | NB | CG | 123.2° | 120.0° |
| NB | CA | HA | 109.3° | 109.5° |
| CA | NB | H6 | 118.4° | 120.0° |
| NB | CG | NE | 118.2° | 120.0° |
| NB | CG | OE | 122.0° | 120.0° |
| CG | NB | H6 | 118.4° | 120.0° |
| NE | CG | OE | 119.8° | 120.0° |
| CG | NE | H7 | 120.0° | 120.0° |
| CG | NE | H8 | 120.0° | 120.0° |
| H | N | H2 | 109.5° | 111.0° |
| H7 | NE | H8 | 120.0° | 120.0° |
Dihedrals
| First atom | Second atom | Third atom | Fourth atom | Torsion (experimental model) | Torsion (ideal model) |
| O | C | OXT | CA | 179.8° | 179.9° |
| O | C | CA | N | 120.0° | 105.0° |
| O | C | CA | NB | 0.1° | 15.0° |
| O | C | OXT | HXT | 0.0° | 0.1° |
| O | C | CA | HA | 121.2° | 135.0° |
| OXT | C | CA | N | 59.9° | 75.0° |
| OXT | C | CA | NB | 179.7° | 165.0° |
| OXT | C | CA | HA | 58.9° | 44.9° |
| C | CA | N | NB | 122.4° | 120.0° |
| C | CA | N | HA | 118.4° | 120.0° |
| C | CA | NB | HA | 121.1° | 120.0° |
| C | CA | NB | CG | 156.9° | 135.0° |
| CA | C | OXT | HXT | 179.9° | 180.0° |
| C | CA | N | H | 180.0° | 63.9° |
| C | CA | N | H2 | 60.0° | 60.0° |
| C | CA | NB | H6 | 23.1° | 45.0° |
| N | CA | NB | HA | 119.4° | 120.0° |
| N | CA | NB | CG | 83.6° | 105.0° |
| CA | N | H | H2 | 120.0° | 123.9° |
| N | CA | NB | H6 | 96.4° | 75.0° |
| CA | NB | CG | H6 | 180.0° | 180.0° |
| CA | NB | CG | NE | 179.3° | 180.0° |
| CA | NB | CG | OE | 0.4° | 0.0° |
| NB | CA | N | H | 57.6° | 176.0° |
| NB | CA | N | H2 | 177.6° | 60.0° |
| NB | CG | NE | OE | 179.7° | 179.9° |
| CG | NB | CA | HA | 35.8° | 15.0° |
| NB | CG | NE | H7 | 179.7° | 0.1° |
| NB | CG | NE | H8 | 0.3° | 180.0° |
| NE | CG | NB | H6 | 0.7° | 0.0° |
| CG | NE | H7 | H8 | 180.0° | 179.9° |
| OE | CG | NB | H6 | 179.6° | 179.9° |
| OE | CG | NE | H7 | 0.0° | 180.0° |
| OE | CG | NE | H8 | 180.0° | 0.1° |
| HA | CA | N | H | 61.7° | 56.0° |
| HA | CA | N | H2 | 58.4° | 180.0° |
| HA | CA | NB | H6 | 144.2° | 165.0° |
