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TS5

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N1CA1sing1.47Å1.48Å
N1HN11sing1.01Å1.02Å
N1HN12sing1.01Å1.02Å
CA1C1sing1.51Å1.51Å
CA1CB1sing1.53Å1.53Å
CA1HA1sing1.09Å1.12Å
C1OE1doub1.21Å1.25Å
C1OE2sing1.34Å1.26Å
OE2HO2sing0.97Å0.95Å
CB1CG1sing1.53Å1.52Å
CB1HB11sing1.09Å1.11Å
CB1HB12sing1.09Å1.11Å
CG1CD1sing1.51Å1.50Å
CG1HG11sing1.09Å1.12Å
CG1HG12sing1.09Å1.11Å
CD1O1doub1.21Å1.31Å
CD1N2sing1.35Å1.33Å
N2CA2sing1.47Å1.43Å
N2HN2sing0.97Å1.02Å
CA2C2sing1.51Å1.51Å
CA2CB2sing1.53Å1.53Å
CA2HA2sing1.09Å1.11Å
C2O2doub1.21Å1.34Å
C2N3sing1.35Å1.35Å
CB2SG2sing1.81Å1.81Å
CB2HB21sing1.09Å1.11Å
CB2HB22sing1.09Å1.11Å
SG2HG2sing1.34Å0.95Å
N3CA3sing1.46Å1.45Å
N3HN3sing0.97Å1.02Å
CA3C3sing1.51Å1.51Å
CA3HA31sing1.09Å1.11Å
CA3HA32sing1.09Å1.11Å
C3O3doub1.21Å1.31Å
C3N1'sing1.35Å1.33Å
N1'C1'sing1.46Å1.44Å
N1'HN1'sing0.97Å1.02Å
C1'C2'sing1.53Å1.52Å
C1'H1'1sing1.09Å1.11Å
C1'H1'2sing1.09Å1.12Å
C2'C3'sing1.53Å1.53Å
C2'H2'1sing1.09Å1.12Å
C2'H2'2sing1.09Å1.11Å
N2'C3'sing1.47Å1.46Å
N2'C4'sing1.47Å1.46Å
N2'HN2'sing1.01Å1.02Å
C3'H3'1sing1.09Å1.11Å
C3'H3'2sing1.09Å1.12Å
C4'C5'sing1.53Å1.53Å
C4'H4'1sing1.09Å1.11Å
C4'H4'2sing1.09Å1.12Å
C5'C6'sing1.53Å1.53Å
C5'H5'1sing1.09Å1.12Å
C5'H5'2sing1.09Å1.11Å
C6'C7'sing1.53Å1.53Å
C6'H6'1sing1.09Å1.11Å
C6'H6'2sing1.09Å1.12Å
C7'N3'sing1.47Å1.46Å
C7'H7'1sing1.09Å1.11Å
C7'H7'2sing1.09Å1.11Å
N3'HN31sing1.01Å1.02Å
N3'HN32sing1.01Å1.02Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
CA1N1HN11110.4°106.7°
CA1N1HN12111.9°106.7°
N1CA1C1110.4°109.4°
N1CA1CB1114.2°109.5°
N1CA1HA1104.9°109.5°
HN11N1HN12111.9°106.7°
C1CA1CB1107.5°109.5°
C1CA1HA1111.9°109.5°
CA1C1OE1119.6°120.0°
CA1C1OE2118.4°120.0°
CB1CA1HA1108.0°109.4°
CA1CB1CG1112.8°109.5°
CA1CB1HB11111.0°109.5°
CA1CB1HB12111.0°109.5°
OE1C1OE2121.9°120.0°
C1OE2HO2118.4°120.0°
CG1CB1HB11111.0°109.5°
CG1CB1HB12111.0°109.4°
CB1CG1CD1106.3°109.5°
CB1CG1HG11113.4°109.5°
CB1CG1HG12113.4°109.5°
HB11CB1HB1299.4°109.4°
CD1CG1HG11113.5°109.4°
CD1CG1HG12113.4°109.5°
CG1CD1O1124.6°120.0°
CG1CD1N2118.5°120.1°
HG11CG1HG1297.0°109.5°
O1CD1N2116.9°120.0°
CD1N2CA2126.1°120.1°
CD1N2HN2112.8°120.0°
CA2N2HN2121.0°119.9°
N2CA2C2115.7°109.5°
N2CA2CB2107.1°109.5°
N2CA2HA2105.7°109.4°
C2CA2CB2105.5°109.5°
C2CA2HA2107.3°109.5°
CA2C2O2122.0°120.0°
CA2C2N3109.4°120.0°
CB2CA2HA2115.9°109.5°
CA2CB2SG2115.9°109.5°
CA2CB2HB21109.9°109.4°
CA2CB2HB22109.9°109.5°
O2C2N3128.5°120.0°
C2N3CA3118.0°120.0°
C2N3HN3117.5°120.0°
SG2CB2HB21109.9°109.5°
SG2CB2HB22109.9°109.4°
CB2SG2HG2115.9°100.0°
HB21CB2HB22100.4°109.5°
CA3N3HN3124.5°119.9°
N3CA3C3112.8°109.5°
N3CA3HA31111.0°109.5°
N3CA3HA32111.0°109.5°
C3CA3HA31111.0°109.4°
C3CA3HA32111.0°109.4°
CA3C3O3115.8°119.9°
CA3C3N1'126.6°120.1°
HA31CA3HA3299.3°109.5°
O3C3N1'117.6°120.0°
C3N1'C1'120.7°120.1°
C3N1'HN1'115.4°119.9°
C1'N1'HN1'123.9°120.0°
N1'C1'C2'105.6°109.6°
N1'C1'H1'1113.7°109.5°
N1'C1'H1'2113.6°109.5°
C2'C1'H1'1113.7°109.4°
C2'C1'H1'2113.6°109.4°
C1'C2'C3'111.0°109.6°
C1'C2'H2'1111.6°109.4°
C1'C2'H2'2111.6°109.4°
H1'1C1'H1'296.8°109.5°
C3'C2'H2'1111.6°109.5°
C3'C2'H2'2111.6°109.5°
C2'C3'N2'113.1°109.6°
C2'C3'H3'1110.9°109.4°
C2'C3'H3'2110.9°109.4°
H2'1C2'H2'298.8°109.4°
C3'N2'C4'114.8°106.8°
C3'N2'HN2'110.3°106.7°
N2'C3'H3'1110.9°109.5°
N2'C3'H3'2110.9°109.5°
C4'N2'HN2'110.3°106.7°
N2'C4'C5'114.8°109.6°
N2'C4'H4'1110.3°109.5°
N2'C4'H4'2110.2°109.4°
H3'1C3'H3'299.4°109.5°
C5'C4'H4'1110.3°109.4°
C5'C4'H4'2110.3°109.5°
C4'C5'C6'113.9°109.6°
C4'C5'H5'1110.6°109.5°
C4'C5'H5'2110.6°109.5°
H4'1C4'H4'2100.0°109.5°
C6'C5'H5'1110.6°109.5°
C6'C5'H5'2110.6°109.4°
C5'C6'C7'113.3°109.6°
C5'C6'H6'1110.8°109.4°
C5'C6'H6'2110.8°109.5°
H5'1C5'H5'299.7°109.4°
C7'C6'H6'1110.8°109.4°
C7'C6'H6'2110.8°109.5°
C6'C7'N3'116.5°109.5°
C6'C7'H7'1109.7°109.4°
C6'C7'H7'2109.7°109.5°
H6'1C6'H6'299.5°109.4°
N3'C7'H7'1109.6°109.5°
N3'C7'H7'2109.7°109.5°
C7'N3'HN31116.5°106.8°
C7'N3'HN32109.7°106.7°
H7'1C7'H7'2100.5°109.5°
HN31N3'HN32109.6°106.7°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
CA1N1HN11HN12125.4°113.8°
N1CA1C1CB1125.1°120.0°
N1CA1C1HA1116.4°120.0°
N1CA1CB1HA1116.3°120.0°
N1CA1C1OE1160.7°30.0°
N1CA1C1OE220.1°150.0°
N1CA1CB1CG171.2°60.0°
N1CA1CB1HB11163.6°180.0°
N1CA1CB1HB1254.1°60.0°
HN11N1CA1C1179.9°60.1°
HN11N1CA1CB158.9°60.0°
HN11N1CA1HA159.2°179.9°
HN12N1CA1C154.7°173.8°
HN12N1CA1CB166.5°53.8°
HN12N1CA1HA1175.4°66.2°
C1CA1CB1HA1120.9°120.0°
CA1C1OE1OE2179.1°180.0°
CA1C1OE2HO2179.9°179.9°
C1CA1CB1CG151.6°180.0°
C1CA1CB1HB1173.7°60.0°
C1CA1CB1HB12176.9°60.0°
CB1CA1C1OE174.2°90.0°
CB1CA1C1OE2105.0°90.0°
CA1CB1CG1HB11125.2°120.0°
CA1CB1CG1HB12125.2°120.0°
CA1CB1HB11HB12116.8°120.0°
CA1CB1CG1CD1158.5°179.9°
CA1CB1CG1HG1133.2°60.0°
CA1CB1CG1HG1276.2°60.0°
HA1CA1C1OE144.3°150.0°
HA1CA1C1OE2136.5°30.0°
HA1CA1CB1CG1172.6°60.0°
HA1CA1CB1HB1147.3°60.1°
HA1CA1CB1HB1262.2°180.0°
OE1C1OE2HO20.9°0.0°
CG1CB1HB11HB12116.9°120.0°
CB1CG1CD1HG11125.3°120.0°
CB1CG1CD1HG12125.3°120.0°
CB1CG1HG11HG12119.3°120.0°
CB1CG1CD1O174.5°0.0°
CB1CG1CD1N2107.0°179.9°
HB11CB1CG1CD176.3°60.0°
HB11CB1CG1HG11158.4°180.0°
HB11CB1CG1HG1249.0°60.0°
HB12CB1CG1CD133.3°60.0°
HB12CB1CG1HG1192.1°60.0°
HB12CB1CG1HG12158.5°180.0°
CD1CG1HG11HG12119.4°120.0°
CG1CD1O1N2178.5°179.9°
CG1CD1N2CA2166.0°180.0°
CG1CD1N2HN213.9°0.1°
HG11CG1CD1O150.7°120.1°
HG11CG1CD1N2127.7°60.0°
HG12CG1CD1O1160.2°120.0°
HG12CG1CD1N218.3°59.9°
O1CD1N2CA215.4°0.1°
O1CD1N2HN2164.7°180.0°
CD1N2CA2HN2180.0°180.0°
CD1N2CA2C2121.7°149.9°
CD1N2CA2CB2121.0°90.0°
CD1N2CA2HA23.1°30.0°
N2CA2C2CB2118.2°120.0°
N2CA2C2HA2117.7°119.9°
N2CA2CB2HA2117.7°119.9°
N2CA2C2O241.4°0.1°
N2CA2C2N3141.2°180.0°
N2CA2CB2SG245.0°60.0°
N2CA2CB2HB2180.2°60.0°
N2CA2CB2HB22170.3°180.0°
HN2N2CA2C258.3°30.0°
HN2N2CA2CB259.0°90.0°
HN2N2CA2HA2176.8°150.0°
C2CA2CB2HA2118.6°120.0°
CA2C2O2N3176.9°180.0°
C2CA2CB2SG2168.8°180.0°
C2CA2CB2HB2143.6°60.0°
C2CA2CB2HB2265.9°60.0°
CA2C2N3CA3169.8°180.0°
CA2C2N3HN310.2°0.0°
CB2CA2C2O276.8°120.0°
CB2CA2C2N3100.7°60.0°
CA2CB2SG2HB21125.2°120.0°
CA2CB2SG2HB22125.2°120.1°
CA2CB2HB21HB22115.7°120.1°
CA2CB2SG2HG2180.0°180.0°
HA2CA2C2O2159.1°120.0°
HA2CA2C2N323.5°60.1°
HA2CA2CB2SG272.6°60.0°
HA2CA2CB2HB21162.2°179.9°
HA2CA2CB2HB2252.6°60.0°
O2C2N3CA37.4°0.0°
O2C2N3HN3172.6°180.0°
C2N3CA3HN3180.0°180.0°
C2N3CA3C3118.3°180.0°
C2N3CA3HA31116.4°60.0°
C2N3CA3HA326.9°60.0°
SG2CB2HB21HB22115.7°119.9°
HB21CB2SG2HG254.8°60.0°
HB22CB2SG2HG254.8°60.0°
N3CA3C3HA31125.3°120.0°
N3CA3C3HA32125.2°120.1°
N3CA3HA31HA32116.8°120.0°
N3CA3C3O336.8°0.1°
N3CA3C3N1'142.8°180.0°
HN3N3CA3C361.6°0.1°
HN3N3CA3HA3163.6°120.0°
HN3N3CA3HA32173.1°120.0°
C3CA3HA31HA32116.9°119.9°
CA3C3O3N1'179.7°179.9°
CA3C3N1'C1'158.2°180.0°
CA3C3N1'HN1'21.8°0.1°
HA31CA3C3O3162.1°120.1°
HA31CA3C3N1'17.5°60.0°
HA32CA3C3O388.4°120.0°
HA32CA3C3N1'91.9°59.9°
O3C3N1'C1'22.2°0.1°
O3C3N1'HN1'157.8°180.0°
C3N1'C1'HN1'180.0°179.9°
C3N1'C1'C2'119.3°180.0°
C3N1'C1'H1'1115.4°60.0°
C3N1'C1'H1'26.0°60.0°
N1'C1'C2'H1'1125.3°120.0°
N1'C1'C2'H1'2125.2°120.0°
N1'C1'H1'1H1'2119.5°120.0°
N1'C1'C2'C3'169.6°180.0°
N1'C1'C2'H2'165.2°59.9°
N1'C1'C2'H2'244.3°60.0°
HN1'N1'C1'C2'60.8°0.0°
HN1'N1'C1'H1'164.6°120.0°
HN1'N1'C1'H1'2174.0°120.0°
C2'C1'H1'1H1'2119.5°119.9°
C1'C2'C3'H2'1125.2°120.1°
C1'C2'C3'H2'2125.3°120.0°
C1'C2'H2'1H2'2117.6°119.9°
C1'C2'C3'N2'172.4°180.0°
C1'C2'C3'H3'162.3°60.0°
C1'C2'C3'H3'247.2°60.0°
H1'1C1'C2'C3'44.2°59.9°
H1'1C1'C2'H2'1169.5°180.0°
H1'1C1'C2'H2'281.0°60.1°
H1'2C1'C2'C3'65.2°60.0°
H1'2C1'C2'H2'160.0°60.1°
H1'2C1'C2'H2'2169.5°180.0°
C3'C2'H2'1H2'2117.6°120.0°
C2'C3'N2'H3'1125.3°120.0°
C2'C3'N2'H3'2125.3°120.0°
C2'C3'N2'C4'178.9°180.0°
C2'C3'N2'HN2'55.8°66.1°
C2'C3'H3'1H3'2116.8°119.9°
H2'1C2'C3'N2'47.2°59.9°
H2'1C2'C3'H3'1172.5°180.0°
H2'1C2'C3'H3'278.0°60.1°
H2'2C2'C3'N2'62.3°60.0°
H2'2C2'C3'H3'163.0°60.0°
H2'2C2'C3'H3'2172.4°180.0°
C3'N2'C4'HN2'125.3°113.9°
N2'C3'H3'1H3'2116.7°120.0°
C3'N2'C4'C5'157.9°180.0°
C3'N2'C4'H4'132.6°60.0°
C3'N2'C4'H4'276.8°60.0°
C4'N2'C3'H3'155.8°59.9°
C4'N2'C3'H3'253.7°60.0°
N2'C4'C5'H4'1125.3°120.0°
N2'C4'C5'H4'2125.3°120.0°
N2'C4'H4'1H4'2116.1°119.9°
N2'C4'C5'C6'172.4°180.0°
N2'C4'C5'H5'162.3°59.9°
N2'C4'C5'H5'247.2°60.0°
HN2'N2'C3'H3'169.5°173.8°
HN2'N2'C3'H3'2178.9°53.9°
HN2'N2'C4'C5'32.6°66.1°
HN2'N2'C4'H4'192.7°173.8°
HN2'N2'C4'H4'2157.9°53.9°
C5'C4'H4'1H4'2116.1°120.0°
C4'C5'C6'H5'1125.2°120.1°
C4'C5'C6'H5'2125.3°120.0°
C4'C5'H5'1H5'2116.4°120.0°
C4'C5'C6'C7'154.3°180.0°
C4'C5'C6'H6'180.4°60.0°
C4'C5'C6'H6'229.0°59.9°
H4'1C4'C5'C6'47.1°60.0°
H4'1C4'C5'H5'1172.4°180.0°
H4'1C4'C5'H5'278.1°60.0°
H4'2C4'C5'C6'62.3°60.0°
H4'2C4'C5'H5'162.9°60.1°
H4'2C4'C5'H5'2172.4°180.0°
C6'C5'H5'1H5'2116.5°119.9°
C5'C6'C7'H6'1125.3°120.0°
C5'C6'C7'H6'2125.3°120.1°
C5'C6'H6'1H6'2116.7°119.9°
C5'C6'C7'N3'176.9°180.0°
C5'C6'C7'H7'157.9°60.0°
C5'C6'C7'H7'251.6°60.0°
H5'1C5'C6'C7'29.0°60.0°
H5'1C5'C6'H6'1154.3°180.0°
H5'1C5'C6'H6'296.2°60.1°
H5'2C5'C6'C7'80.4°59.9°
H5'2C5'C6'H6'144.8°60.1°
H5'2C5'C6'H6'2154.3°180.0°
C7'C6'H6'1H6'2116.6°120.0°
C6'C7'N3'H7'1125.2°120.0°
C6'C7'N3'H7'2125.3°120.1°
C6'C7'H7'1H7'2115.5°120.0°
C6'C7'N3'HN31179.9°180.0°
C6'C7'N3'HN3254.7°66.1°
H6'1C6'C7'N3'51.6°60.0°
H6'1C6'C7'H7'1176.8°180.0°
H6'1C6'C7'H7'273.7°60.0°
H6'2C6'C7'N3'57.9°59.9°
H6'2C6'C7'H7'167.3°60.1°
H6'2C6'C7'H7'2176.9°179.9°
N3'C7'H7'1H7'2115.5°120.0°
C7'N3'HN31HN32125.2°113.8°
H7'1C7'N3'HN3154.7°60.0°
H7'1C7'N3'HN3270.5°53.8°
H7'2C7'N3'HN3154.8°60.0°
H7'2C7'N3'HN32180.0°173.8°

218853

PDB entries from 2024-04-24

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