Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

THG

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
N3C2sing1.36Å1.41ÅAromatic
N3C4sing1.35Å1.40ÅAromatic
N3HN3sing0.97Å1.02Å
C2N1doub1.32Å1.33ÅAromatic
C2N2sing1.37Å1.39Å
N1C8Asing1.34Å1.35ÅAromatic
C8AC4Adoub1.39Å1.39ÅAromatic
C8AN8sing1.39Å1.40Å
C4AC4sing1.40Å1.41ÅAromatic
C4AN5sing1.41Å1.42Å
C4O4doub1.22Å1.24Å
N8C7sing1.47Å1.48Å
N8HN8sing0.97Å1.02Å
C7C6sing1.54Å1.54Å
C7HC71sing1.09Å1.11Å
C7HC72sing1.09Å1.12Å
C6N5sing1.47Å1.47Å
C6C9sing1.53Å1.51Å
C6HC6sing1.09Å1.12Å
N5HN5sing0.97Å1.02Å
C9N10sing1.46Å1.48Å
C9HC91sing1.09Å1.12Å
C9HC92sing1.09Å1.11Å
N10C4'sing1.39Å1.42Å
N10H10sing0.97Å1.02Å
C4'C3'doub1.39Å1.42ÅAromatic
C4'C5'sing1.39Å1.41ÅAromatic
C3'C2'sing1.37Å1.40ÅAromatic
C3'HC3sing1.08Å1.10Å
C2'C1'doub1.40Å1.42ÅAromatic
C2'HC2sing1.08Å1.10Å
C1'C6'sing1.40Å1.41ÅAromatic
C1'C11sing1.48Å1.47Å
C6'C5'doub1.38Å1.39ÅAromatic
C6'HC61sing1.08Å1.10Å
C5'HC5sing1.08Å1.10Å
C11Nsing1.35Å1.38Å
C11O11doub1.22Å1.24Å
NCAsing1.47Å1.47Å
NHNsing0.97Å1.02Å
CACsing1.51Å1.51Å
CACBsing1.53Å1.55Å
CAHCAsing1.09Å1.12Å
COX2sing1.34Å1.24Å
COX1doub1.21Å1.24Å
OX2HX2sing0.97Å0.95Å
CBCGsing1.53Å1.54Å
CBHCB1sing1.09Å1.12Å
CBHCB2sing1.09Å1.12Å
CGCDsing1.51Å1.52Å
CGHCG1sing1.09Å1.12Å
CGHCG2sing1.09Å1.11Å
CDOE1doub1.21Å1.24Å
CDOE2sing1.34Å1.24Å
OE2HE2sing0.97Å0.95Å
N2HN21sing0.97Å1.02Å
N2HN22sing0.97Å1.02Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
C2N3C4121.2°120.1°
C2N3HN3119.7°119.9°
N3C2N1122.3°121.6°
N3C2N2115.8°119.2°
C4N3HN3119.1°120.0°
N3C4C4A114.5°118.5°
N3C4O4119.3°120.7°
N1C2N2121.9°119.2°
C2N1C8A118.2°121.0°
C2N2HN21109.9°120.0°
C2N2HN22115.8°120.0°
N1C8AC4A122.1°119.6°
N1C8AN8117.2°120.5°
C4AC8AN8120.7°119.8°
C8AC4AC4121.5°119.1°
C8AC4AN5121.1°120.1°
C8AN8C7119.8°119.1°
C8AN8HN8108.5°120.5°
C4C4AN5117.4°120.8°
C4AC4O4126.2°120.8°
C4AN5C6118.2°118.5°
C4AN5HN5109.1°120.8°
C7N8HN8108.5°120.4°
N8C7C6112.3°108.3°
N8C7HC71111.2°109.7°
N8C7HC72111.1°109.7°
C6C7HC71111.1°109.7°
C6C7HC72111.1°109.7°
C7C6N5110.5°108.0°
C7C6C9111.9°109.7°
C7C6HC6105.7°109.8°
HC71C7HC7299.2°109.7°
N5C6C9104.7°109.7°
N5C6HC6112.8°109.8°
C6N5HN5109.0°120.7°
C9C6HC6111.4°109.7°
C6C9N10105.5°109.5°
C6C9HC91113.7°109.5°
C6C9HC92113.7°109.5°
N10C9HC91113.7°109.5°
N10C9HC92113.7°109.5°
C9N10C4'118.9°120.0°
C9N10H10108.9°119.9°
HC91C9HC9296.8°109.5°
C4'N10H10108.8°120.1°
N10C4'C3'118.9°119.9°
N10C4'C5'120.3°119.9°
C3'C4'C5'120.8°120.2°
C4'C3'C2'119.4°120.1°
C4'C3'HC3120.9°120.0°
C4'C5'C6'119.3°120.0°
C4'C5'HC5121.1°120.0°
C2'C3'HC3119.7°120.0°
C3'C2'C1'119.1°119.9°
C3'C2'HC2119.9°120.1°
C1'C2'HC2121.0°120.0°
C2'C1'C6'120.9°119.8°
C2'C1'C11121.6°120.1°
C6'C1'C11117.5°120.1°
C1'C6'C5'119.9°120.0°
C1'C6'HC61120.7°120.0°
C1'C11N116.7°120.0°
C1'C11O11122.5°120.0°
C5'C6'HC61119.4°120.0°
C6'C5'HC5119.6°120.0°
NC11O11120.8°120.0°
C11NCA119.8°120.0°
C11NHN116.7°120.0°
CANHN123.5°120.0°
NCAC110.7°109.4°
NCACB110.1°109.5°
NCAHCA108.8°109.5°
CCACB111.3°109.5°
CCAHCA107.5°109.4°
CACOX2119.0°120.0°
CACOX1117.2°120.1°
CBCAHCA108.3°109.5°
CACBCG111.9°109.5°
CACBHCB1111.3°109.5°
CACBHCB2111.3°109.4°
OX2COX1123.8°119.9°
COX2HX2119.0°120.0°
CGCBHCB1111.3°109.5°
CGCBHCB2111.3°109.5°
CBCGCD111.2°109.5°
CBCGHCG1111.6°109.5°
CBCGHCG2111.6°109.5°
HCB1CBHCB299.1°109.5°
CDCGHCG1111.6°109.4°
CDCGHCG2111.6°109.5°
CGCDOE1118.8°120.0°
CGCDOE2116.8°120.0°
HCG1CGHCG298.8°109.5°
OE1CDOE2124.4°120.0°
CDOE2HE2116.9°120.1°
HN21N2HN22109.9°120.0°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
C2N3C4HN3180.0°179.6°
N3C2N1N2179.6°179.8°
N3C2N1C8A0.1°0.3°
C2N3C4C4A4.4°0.4°
C2N3C4O4176.1°179.8°
N3C2N2HN2154.7°179.7°
N3C2N2HN22180.0°0.5°
C4N3C2N11.7°0.4°
C4N3C2N2178.0°179.8°
N3C4C4AC8A6.1°0.3°
N3C4C4AO4179.4°179.8°
N3C4C4AN5174.6°179.7°
HN3N3C2N1178.3°180.0°
HN3N3C2N22.1°0.3°
HN3N3C4C4A175.5°180.0°
HN3N3C4O43.9°0.2°
C2N1C8AC4A1.8°0.1°
C2N1C8AN8178.2°179.7°
N1C2N2HN21124.9°0.1°
N1C2N2HN220.4°179.7°
N2C2N1C8A179.4°179.9°
C2N2HN21HN22128.6°179.8°
N1C8AC4AN8180.0°179.8°
N1C8AC4AC45.0°0.2°
N1C8AC4AN5175.6°179.8°
N1C8AN8C7175.9°162.9°
N1C8AN8HN850.6°17.0°
C8AC4AC4N5179.4°180.0°
C8AC4AC4O4174.5°179.9°
C4AC8AN8C74.1°17.3°
C4AC8AN8HN8129.3°162.8°
C8AC4AN5C615.9°16.0°
C8AC4AN5HN5141.1°163.9°
N8C8AC4AC4174.9°179.6°
N8C8AC4AN54.4°0.4°
C8AN8C7HN8125.3°179.8°
C8AN8C7C630.2°45.7°
C8AN8C7HC7195.1°74.0°
C8AN8C7HC72155.4°165.4°
C4C4AN5C6164.8°164.0°
C4C4AN5HN539.5°16.0°
N5C4AC4O44.8°0.1°
C4AN5C6C740.9°44.1°
C4AN5C6HN5125.3°180.0°
C4AN5C6C979.7°75.5°
C4AN5C6HC6159.0°163.8°
N8C7C6HC71125.2°119.8°
N8C7C6HC72125.2°119.7°
N8C7HC71HC72117.1°120.6°
N8C7C6N546.8°56.3°
N8C7C6C969.5°63.3°
N8C7C6HC6169.1°176.0°
HN8N8C7C6155.4°134.4°
HN8N8C7HC7130.2°105.9°
HN8N8C7HC7279.3°14.7°
C6C7HC71HC72117.0°120.5°
C7C6N5C9120.7°119.6°
C7C6N5HC6118.1°119.7°
C7C6C9HC6118.1°120.8°
C7C6N5HN5166.2°135.9°
C7C6C9N10167.4°178.6°
C7C6C9HC9167.3°58.6°
C7C6C9HC9242.2°61.4°
HC71C7C6N578.4°63.4°
HC71C7C6C9165.3°177.0°
HC71C7C6HC643.9°56.3°
HC72C7C6N5172.0°176.0°
HC72C7C6C955.8°56.4°
HC72C7C6HC665.7°64.3°
N5C6C9HC6122.2°120.7°
N5C6C9N1047.7°60.0°
N5C6C9HC91173.0°60.0°
N5C6C9HC9277.6°180.0°
C9C6N5HN545.5°104.5°
C6C9N10HC91125.3°120.0°
C6C9N10HC92125.3°120.0°
C6C9HC91HC92119.6°120.0°
C6C9N10C4'129.5°180.0°
C6C9N10H104.2°0.0°
HC6C6N5HN575.7°16.2°
HC6C6C9N1074.5°60.7°
HC6C6C9HC9150.8°179.3°
HC6C6C9HC92160.3°59.3°
N10C9HC91HC92119.6°120.0°
C9N10C4'H10125.3°180.0°
C9N10C4'C3'177.8°180.0°
C9N10C4'C5'1.3°0.3°
HC91C9N10C4'105.2°60.0°
HC91C9N10H10129.5°120.0°
HC92C9N10C4'4.2°60.0°
HC92C9N10H10121.0°120.0°
N10C4'C3'C5'179.0°179.7°
N10C4'C3'C2'172.6°180.0°
N10C4'C3'HC37.4°0.0°
N10C4'C5'C6'172.7°179.8°
N10C4'C5'HC57.4°0.3°
H10N10C4'C3'57.0°0.0°
H10N10C4'C5'124.0°179.7°
C4'C3'C2'HC3180.0°180.0°
C4'C3'C2'C1'0.4°0.0°
C4'C3'C2'HC2179.6°180.0°
C3'C4'C5'C6'6.3°0.6°
C3'C4'C5'HC5173.6°180.0°
C5'C4'C3'C2'6.4°0.3°
C5'C4'C3'HC3173.6°179.7°
C4'C5'C6'C1'0.2°0.5°
C4'C5'C6'HC5180.0°179.4°
C4'C5'C6'HC61179.9°179.6°
C3'C2'C1'HC2180.0°180.0°
C3'C2'C1'C6'5.8°0.1°
C3'C2'C1'C11173.8°180.0°
HC3C3'C2'C1'179.6°180.0°
HC3C3'C2'HC20.4°0.0°
C2'C1'C6'C11179.6°180.0°
C2'C1'C6'C5'5.9°0.2°
C2'C1'C6'HC61174.1°180.0°
C2'C1'C11N2.1°180.0°
C2'C1'C11O11176.0°0.0°
HC2C2'C1'C6'174.2°180.0°
HC2C2'C1'C116.2°0.0°
C1'C6'C5'HC61180.0°179.8°
C1'C6'C5'HC5179.8°179.9°
C6'C1'C11N178.4°0.0°
C6'C1'C11O113.6°180.0°
C11C1'C6'C5'173.6°179.8°
C11C1'C6'HC616.4°0.1°
C1'C11NO11178.1°180.0°
C1'C11NCA177.2°180.0°
C1'C11NHN2.8°0.1°
HC61C6'C5'HC50.2°0.2°
C11NCAHN180.0°179.9°
C11NCAC157.7°90.0°
C11NCACB78.8°150.0°
C11NCAHCA39.7°29.9°
O11C11NCA0.9°0.1°
O11C11NHN179.1°180.0°
NCACCB122.8°120.0°
NCACHCA118.8°120.0°
NCACBHCA118.8°120.1°
NCACOX212.5°30.0°
NCACOX1169.8°150.1°
NCACBCG60.2°60.0°
NCACBHCB165.1°60.0°
NCACBHCB2174.6°180.0°
HNNCAC22.3°90.1°
HNNCACB101.2°29.9°
HNNCAHCA140.3°149.9°
CCACBHCA118.0°120.0°
CACOX2OX1177.5°180.0°
CACOX2HX2180.0°180.0°
CCACBCG63.0°180.0°
CCACBHCB1171.8°60.0°
CCACBHCB262.3°60.0°
CBCACOX2110.3°90.0°
CBCACOX167.4°90.0°
CACBCGHCB1125.3°120.0°
CACBCGHCB2125.2°120.0°
CACBHCB1HCB2117.2°120.0°
CACBCGCD178.2°180.0°
CACBCGHCG152.9°60.0°
CACBCGHCG256.6°60.0°
HCACACOX2131.3°150.0°
HCACACOX151.0°30.0°
HCACACBCG179.0°60.0°
HCACACBHCB153.8°179.9°
HCACACBHCB255.7°60.0°
OX1COX2HX22.5°0.0°
CGCBHCB1HCB2117.2°120.0°
CBCGCDHCG1125.3°120.0°
CBCGCDHCG2125.2°120.0°
CBCGHCG1HCG2117.5°120.0°
CBCGCDOE172.0°0.0°
CBCGCDOE2108.1°179.9°
HCB1CBCGCD56.5°60.0°
HCB1CBCGHCG1178.2°180.0°
HCB1CBCGHCG268.7°60.0°
HCB2CBCGCD53.0°60.0°
HCB2CBCGHCG172.3°59.9°
HCB2CBCGHCG2178.2°NaN°
CDCGHCG1HCG2117.5°120.0°
CGCDOE1OE2179.9°179.9°
CGCDOE2HE2180.0°180.0°
HCG1CGCDOE1162.7°120.0°
HCG1CGCDOE217.2°60.1°
HCG2CGCDOE153.2°120.0°
HCG2CGCDOE2126.7°59.9°
OE1CDOE2HE20.1°0.1°

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon