Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

TDC

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
O12C12doub1.22Å1.22Å
C12C1Bsing1.50Å1.50Å
C12C1Csing1.51Å1.51Å
C1BC11sing1.40Å1.40ÅAromatic
C1BC51doub1.39Å1.39ÅAromatic
C11O11sing1.29Å1.29Å
C11C1Adoub1.40Å1.40ÅAromatic
C1AC10sing1.40Å1.40ÅAromatic
C1AC61sing1.40Å1.40ÅAromatic
C10O10sing1.37Å1.37Å
C10C9doub1.39Å1.39ÅAromatic
C9C8sing1.40Å1.40ÅAromatic
C8C7doub1.40Å1.40ÅAromatic
C7C61sing1.41Å1.41ÅAromatic
C61C6doub1.41Å1.41ÅAromatic
C6C62sing1.52Å1.52Å
C6C51sing1.40Å1.40ÅAromatic
C51C5sing1.53Å1.53Å
C5C41sing1.54Å1.54Å
C1CC1sing1.52Å1.52Å
C1CO1Csing1.43Å1.43Å
C1CC41sing1.51Å1.51Å
C1O1doub1.25Å1.25Å
C1C2sing1.38Å1.38Å
C41C4sing1.54Å1.54Å
C4N4sing1.51Å1.51Å
C4C3sing1.51Å1.51Å
N4C43sing1.48Å1.48Å
N4C42sing1.48Å1.48Å
C3O3sing1.26Å1.26Å
C3C2doub1.38Å1.38Å
C2C21sing1.38Å1.38Å
C21O21doub1.24Å1.24Å
C21N21sing1.34Å1.34Å
O11H11sing0.95Å0.95Å
O10H10sing0.95Å0.95Å
C9H9sing1.08Å1.08Å
C8H8sing1.08Å1.08Å
C7H7sing1.08Å1.08Å
C62H621sing1.10Å1.10Å
C62H622sing1.10Å1.10Å
C62H623sing1.10Å1.10Å
C5H5C1sing1.10Å1.10Å
C5H5C2sing1.10Å1.10Å
C41H41sing1.10Å1.10Å
O1CH1Csing0.95Å0.95Å
C4H4sing1.10Å1.10Å
C43H431sing1.10Å1.10Å
C43H432sing1.10Å1.10Å
C43H433sing1.10Å1.10Å
C42H421sing1.10Å1.10Å
C42H422sing1.10Å1.10Å
C42H423sing1.10Å1.10Å
O3H3sing0.95Å0.95Å
N21H211sing1.00Å1.00Å
N21H212sing1.00Å1.00Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O12C12C1B122.0°122.0°
O12C12C1C116.6°116.6°
C1BC12C1C120.8°120.8°
C12C1BC11120.8°120.8°
C12C1BC51118.2°118.2°
C12C1CC1114.9°114.9°
C12C1CO1C105.3°105.3°
C12C1CC41108.2°108.2°
C11C1BC51121.0°121.0°
C1BC11O11120.1°120.1°
C1BC11C1A119.5°119.5°
C1BC51C6119.6°119.6°
C1BC51C5119.9°119.9°
O11C11C1A120.4°120.4°
C11O11H11109.5°109.5°
C11C1AC10119.6°119.6°
C11C1AC61120.0°120.0°
C10C1AC61120.4°120.4°
C1AC10O10120.4°120.4°
C1AC10C9119.8°119.8°
C1AC61C7119.7°119.7°
C1AC61C6120.0°120.0°
O10C10C9119.8°119.8°
C10O10H10109.5°109.5°
C10C9C8120.2°120.2°
C10C9H9119.9°119.9°
C9C8C7120.4°120.4°
C8C9H9119.9°119.9°
C9C8H8119.8°119.8°
C8C7C61119.5°119.5°
C7C8H8119.8°119.8°
C8C7H7120.3°120.3°
C7C61C6120.2°120.2°
C61C7H7120.2°120.2°
C61C6C62119.5°119.5°
C61C6C51119.9°119.9°
C62C6C51120.6°120.6°
C6C62H621109.5°109.5°
C6C62H622109.5°109.5°
C6C62H623109.4°109.5°
C6C51C5120.5°120.5°
C51C5C41113.1°113.1°
C51C5H5C1108.3°108.3°
C51C5H5C2107.5°107.5°
C5C41C1C107.3°107.3°
C5C41C4110.0°110.0°
C41C5H5C1108.3°108.3°
C41C5H5C2107.5°107.5°
C5C41H41111.3°111.3°
C1C1CO1C105.5°105.5°
C1C1CC41107.5°107.5°
C1CC1O1119.0°119.0°
C1CC1C2117.9°117.9°
O1CC1CC41115.6°115.6°
C1CO1CH1C109.5°109.5°
C1CC41C4111.7°111.7°
C1CC41H41109.6°109.6°
O1C1C2123.1°123.1°
C1C2C3118.8°118.8°
C1C2C21119.7°119.7°
C41C4N4115.3°115.3°
C41C4C3112.7°112.7°
C4C41H41106.9°106.9°
C41C4H4103.8°103.8°
N4C4C3112.3°112.3°
C4N4C43116.1°116.1°
C4N4C42110.9°110.9°
N4C4H4104.3°104.3°
C4C3O3115.5°115.5°
C4C3C2122.2°122.2°
C3C4H4107.4°107.4°
C43N4C42112.1°112.1°
N4C43H431109.5°109.5°
N4C43H432109.5°109.5°
N4C43H433109.5°109.5°
N4C42H421109.5°109.5°
N4C42H422109.5°109.5°
N4C42H423109.5°109.5°
O3C3C2122.3°122.3°
C3O3H3109.5°109.5°
C3C2C21121.5°121.5°
C2C21O21122.3°122.3°
C2C21N21122.5°122.5°
O21C21N21115.2°115.2°
C21N21H211111.9°111.9°
C21N21H212124.1°124.0°
H621C62H622109.5°109.5°
H621C62H623109.5°109.4°
H622C62H623109.5°109.5°
H5C1C5H5C2112.3°112.3°
H431C43H432109.5°109.5°
H431C43H433109.5°109.5°
H432C43H433109.5°109.5°
H421C42H422109.5°109.5°
H421C42H423109.4°109.4°
H422C42H423109.5°109.5°
H211N21H212124.0°124.1°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O12C12C1BC1C170.5°170.5°
O12C12C1BC115.0°5.0°
O12C12C1BC51171.7°171.7°
O12C12C1CC186.3°86.3°
O12C12C1CO1C29.3°29.3°
O12C12C1CC41153.6°153.6°
C12C1BC11C51176.6°176.6°
C12C1BC11O113.9°3.9°
C12C1BC11C1A175.5°175.5°
C12C1BC51C6176.5°176.5°
C12C1BC51C54.7°4.7°
C1BC12C1CC184.7°84.7°
C1BC12C1CO1C159.6°159.6°
C1BC12C1CC4135.4°35.4°
C1CC12C1BC11175.5°175.5°
C1CC12C1BC511.2°1.2°
C12C1CC41C561.6°61.6°
C12C1CC1O1C115.5°115.5°
C12C1CC1C41120.5°120.5°
C12C1CO1CC41119.4°119.4°
C12C1CC1O19.2°9.2°
C12C1CC1C2171.0°171.0°
C12C1CC41C4177.7°177.7°
C12C1CC41H4159.4°59.4°
C12C1CO1CH1C129.8°129.8°
C1BC11O11C1A179.4°179.4°
C1BC11C1AC10179.3°179.3°
C1BC11C1AC610.2°0.2°
C11C1BC51C60.2°0.2°
C11C1BC51C5178.6°178.6°
C1BC11O11H1164.0°64.0°
C51C1BC11O11179.5°179.5°
C51C1BC11C1A1.1°1.1°
C1BC51C6C612.0°2.0°
C1BC51C6C62179.9°179.9°
C1BC51C6C5178.8°178.8°
C1BC51C5C4124.4°24.4°
C1BC51C5H5C1144.4°144.4°
C1BC51C5H5C294.0°94.0°
O11C11C1AC100.1°0.1°
O11C11C1AC61179.2°179.2°
C11C1AC10C61179.0°179.0°
C11C1AC10O100.4°0.4°
C11C1AC10C9180.0°180.0°
C11C1AC61C7178.3°178.3°
C11C1AC61C62.4°2.4°
C1AC11O11H11115.4°115.4°
C1AC10O10C9179.6°179.6°
C1AC10C9C80.1°0.1°
C10C1AC61C72.6°2.6°
C10C1AC61C6178.5°178.5°
C1AC10O10H1065.0°65.0°
C1AC10C9H9179.9°179.9°
C61C1AC10O10179.5°179.5°
C61C1AC10C90.9°0.9°
C1AC61C7C83.2°3.2°
C1AC61C7C6175.9°175.9°
C1AC61C6C62178.7°178.7°
C1AC61C6C513.3°3.3°
C1AC61C7H7176.8°176.8°
O10C10C9C8179.4°179.4°
O10C10C9H90.6°0.6°
C10C9C8H9180.0°180.0°
C10C9C8C70.5°0.5°
C9C10O10H10115.5°115.5°
C10C9C8H8179.5°179.5°
C9C8C7H8180.0°180.0°
C9C8C7C612.2°2.2°
C9C8C7H7177.8°177.8°
C8C7C61H7180.0°180.0°
C8C7C61C6179.1°179.1°
C7C8C9H9179.5°179.5°
C7C61C6C622.9°2.9°
C7C61C6C51179.2°179.2°
C61C7C8H8177.9°177.9°
C61C6C62C51177.9°177.9°
C61C6C51C5179.2°179.2°
C6C61C7H70.9°0.9°
C61C6C62H62165.8°65.8°
C61C6C62H62254.2°54.2°
C61C6C62H623174.2°174.2°
C62C6C51C51.3°1.3°
C6C62H621H622120.0°120.0°
C6C62H621H623120.0°120.0°
C6C62H622H623120.0°120.0°
C6C51C5C41154.4°154.4°
C51C6C62H621116.2°116.2°
C51C6C62H622123.7°123.8°
C51C6C62H6233.8°3.7°
C6C51C5H5C134.4°34.4°
C6C51C5H5C287.2°87.2°
C51C5C41H5C1120.0°120.0°
C51C5C41H5C2118.4°118.4°
C51C5C41C1C58.3°58.3°
C51C5C41C4180.0°180.0°
C51C5H5C1H5C2118.5°118.5°
C51C5C41H4161.7°61.7°
C5C41C1CC163.1°63.1°
C5C41C1CO1C179.4°179.4°
C5C41C1CC4120.7°120.7°
C5C41C1CH41121.0°121.0°
C5C41C4H41121.0°121.0°
C5C41C4N4138.9°138.9°
C5C41C4C390.4°90.4°
C41C5H5C1H5C2118.5°118.5°
C5C41C4H425.5°25.5°
C1C1CO1CC41118.6°118.6°
C1CC1O1C2179.8°179.8°
C1C1CC41C457.6°57.6°
C1CC1C2C310.1°10.1°
C1CC1C2C21168.2°168.2°
C1C1CC41H41175.9°175.9°
C1C1CO1CH1C108.3°108.3°
O1CC1CC1O1106.4°106.4°
O1CC1CC1C273.5°73.5°
O1CC1CC41C459.9°59.9°
O1CC1CC41H4158.4°58.4°
C41C1CC1O1129.7°129.7°
C41C1CC1C250.4°50.4°
C1CC41C4H41119.9°119.9°
C1CC41C4N4102.0°102.0°
C1CC41C4C328.7°28.7°
C1CC41C5H5C1178.3°178.3°
C1CC41C5H5C260.1°60.1°
C41C1CO1CH1C10.4°10.4°
C1CC41C4H4144.6°144.6°
O1C1C2C3170.1°170.1°
O1C1C2C2111.6°11.6°
C1C2C3C423.6°23.6°
C1C2C3O3157.0°157.0°
C1C2C3C21178.3°178.3°
C1C2C21O21179.6°179.6°
C1C2C21N211.6°1.6°
C41C4N4C3130.9°130.9°
C41C4N4H4113.1°113.1°
C41C4C3H4113.7°113.7°
C41C4N4C4366.2°66.2°
C41C4N4C4263.2°63.2°
C41C4C3O3167.5°167.5°
C41C4C3C213.2°13.2°
C4C41C5H5C160.0°60.0°
C4C41C5H5C261.6°61.6°
N4C4C3H4114.1°114.1°
C4N4C43C42128.8°128.8°
N4C4C3O335.3°35.3°
N4C4C3C2145.4°145.4°
N4C4C41H4117.9°17.9°
C4N4C43H431163.9°163.9°
C4N4C43H43243.9°43.9°
C4N4C43H43376.1°76.1°
C4N4C42H42189.6°89.6°
C4N4C42H42230.4°30.4°
C4N4C42H423150.4°150.4°
C3C4N4C4364.7°64.7°
C3C4N4C42165.9°165.9°
C4C3O3C2179.4°179.4°
C4C3C2C21158.1°158.1°
C3C4C41H41148.6°148.6°
C4C3O3H354.6°54.6°
C43N4C4H4179.3°179.3°
N4C43H431H432120.0°120.0°
N4C43H431H433120.0°120.0°
N4C43H432H433120.0°120.0°
C43N4C42H42141.9°41.9°
C43N4C42H422161.9°161.9°
C43N4C42H42378.1°78.1°
C42N4C4H449.9°49.9°
C42N4C43H43167.3°67.3°
C42N4C43H432172.7°172.7°
C42N4C43H43352.7°52.7°
N4C42H421H422120.0°120.0°
N4C42H421H423120.0°120.0°
N4C42H422H423120.0°120.0°
O3C3C2C2121.2°21.2°
O3C3C4H478.8°78.8°
C3C2C21O212.1°2.1°
C3C2C21N21179.9°179.9°
C2C3C4H4100.6°100.6°
C2C3O3H3124.8°124.8°
C2C21O21N21178.1°178.1°
C2C21N21H2111.1°1.1°
C2C21N21H212178.9°178.9°
O21C21N21H211179.2°179.2°
O21C21N21H2120.8°0.8°
C21N21H211H212180.0°180.0°
H9C9C8H80.5°0.5°
H8C8C7H72.1°2.1°
H621C62H622H623120.0°119.9°
H5C1C5C41H4158.3°58.3°
H5C2C5C41H41179.9°179.9°
H41C41C4H495.5°95.5°
H431C43H432H433120.0°120.0°
H421C42H422H423120.0°120.0°

218853

PDB entries from 2024-04-24

PDB statisticsPDBj update infoContact PDBjnumon