Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

T0Y

Bonds
First atomSecond atomBond order typeDistance
(experimental model)
Distance
(ideal model)
Properties
C02O01sing1.43Å1.41Å
C03C02sing1.53Å1.44Å
C04C03sing1.53Å1.53Å
N05C04sing1.47Å1.44Å
C07C06sing1.51Å1.54Å
C08C07sing1.38Å1.53ÅAromatic
C09C08doub1.33Å1.43ÅAromatic
S10C09sing1.76Å1.62ÅAromatic
C11S10sing1.76Å1.62ÅAromatic
C06N05sing1.47Å1.24Å
C12N05sing1.47Å1.45Å
C13C12sing1.53Å1.53Å
C02C13sing1.53Å1.44Å
C07C11doub1.33Å1.43ÅAromatic
C13H131sing1.09Å1.10Å
C13H132sing1.09Å1.10Å
C02H021sing1.09Å1.10Å
C03H031sing1.09Å1.10Å
C03H032sing1.09Å1.10Å
C04H041sing1.09Å1.10Å
C04H042sing1.09Å1.10Å
C06H061sing1.09Å1.10Å
C06H062sing1.09Å1.10Å
C08H081sing1.08Å1.08Å
C09H091sing1.08Å1.08Å
C11H111sing1.08Å1.08Å
C12H121sing1.09Å1.10Å
C12H122sing1.09Å1.10Å
O01H011sing0.97Å0.95Å
Angles
First atomSecond atomThird atomAngle
(experimental model)
Angle
(ideal model)
O01C02C03109.3°109.5°
O01C02C13111.8°109.5°
O01C02H021108.5°109.5°
C02O01H011109.5°114.0°
C02C03C04114.2°109.3°
C03C02C13111.0°109.1°
C03C02H021108.1°109.6°
C02C03H031108.3°109.5°
C02C03H032108.3°109.5°
C03C04N05115.3°109.5°
C04C03H031108.3°109.5°
C04C03H032108.3°109.6°
C03C04H041108.0°109.5°
C03C04H042108.0°109.4°
C04N05C06114.0°111.0°
C04N05C12109.4°111.2°
N05C04H041108.0°109.5°
N05C04H042108.0°109.5°
C06C07C08124.8°122.5°
C07C06N05115.4°109.5°
C06C07C11126.1°122.5°
C07C06H061108.0°109.5°
C07C06H062108.0°109.5°
C07C08C09110.0°114.9°
C08C07C11109.1°115.0°
C07C08H081125.0°122.6°
C08C09S10109.9°109.6°
C09C08H081125.0°122.5°
C08C09H091125.1°125.3°
C09S10C11100.5°91.0°
S10C09H091125.0°125.2°
S10C11C07110.5°109.6°
S10C11H111124.7°125.2°
C06N05C12109.6°111.0°
N05C06H061108.0°109.4°
N05C06H062108.0°109.5°
N05C12C13113.5°109.5°
N05C12H121108.5°109.5°
N05C12H122108.5°109.5°
C12C13C02112.9°109.3°
C12C13H131108.6°109.5°
C12C13H132108.6°109.5°
C13C12H121108.4°109.4°
C13C12H122108.5°109.4°
C02C13H131108.6°109.5°
C02C13H132108.6°109.5°
C13C02H021108.0°109.6°
C07C11H111124.7°125.2°
H131C13H132109.5°109.5°
H031C03H032109.4°109.5°
H041C04H042109.5°109.5°
H061C06H062109.5°109.5°
H121C12H122109.5°109.4°
Dihedrals
First atomSecond atomThird atomFourth atomTorsion
(experimental model)
Torsion
(ideal model)
O01C02C03C13123.8°119.9°
O01C02C03H021117.9°120.1°
O01C02C03C0475.7°62.2°
O01C02C13C1270.7°62.2°
O01C02C13H021119.3°120.1°
O01C02C13H13149.8°177.8°
O01C02C13H132168.8°57.7°
O01C02C03H03145.0°57.7°
O01C02C03H032163.6°177.7°
C02C03C04H031120.7°119.9°
C02C03C04H032120.7°120.0°
C02C03C04N0548.5°59.2°
C03C02C13C1251.6°57.7°
C03C02C13H021118.3°120.0°
C03C02C13H131172.2°62.3°
C03C02C13H13268.9°177.6°
C02C03H031H032117.9°120.1°
C02C03C04H04172.3°60.8°
C02C03C04H042169.4°179.2°
C03C02O01H011180.0°60.3°
C03C04N05H041120.8°120.0°
C03C04N05H042120.9°119.9°
C03C04N05C06172.0°174.1°
C03C04N05C1248.8°61.8°
C04C03C02C1348.1°57.7°
C04C03C02H021166.4°177.7°
C04C03H031H032117.8°120.2°
C03C04H041H042117.3°119.9°
C04N05C06C0745.0°65.8°
C04N05C06C12123.1°124.2°
C04N05C12C1352.1°61.8°
N05C04C03H031169.3°179.1°
N05C04C03H03272.2°60.8°
N05C04H041H042117.3°120.0°
C04N05C06H06175.9°54.2°
C04N05C06H062165.9°174.2°
C04N05C12H12168.5°178.3°
C04N05C12H122172.7°58.3°
C06C07C08C11180.0°179.7°
C06C07C08C09179.6°180.0°
C06C07C11S10179.8°179.9°
C07C06N05H061120.9°120.0°
C07C06N05H062120.9°120.0°
C07C06N05C12168.0°170.0°
C07C06H061H062117.3°120.0°
C06C07C08H0810.4°0.0°
C06C07C11H1110.2°0.0°
C07C08C09H081180.0°180.0°
C07C08C09S100.4°0.0°
C08C07C11S100.2°0.4°
C08C07C06N05126.8°89.7°
C08C07C06H0616.0°30.2°
C08C07C06H062112.3°150.3°
C07C08C09H091179.7°180.0°
C08C07C11H111179.8°179.7°
C08C09S10H091180.0°180.0°
C08C09S10C110.2°0.1°
C09C08C07C110.3°0.3°
C09S10C11C070.0°0.3°
S10C09C08H081179.6°180.0°
C09S10C11H111180.0°179.8°
S10C11C07H111180.0°179.9°
C11S10C09H091179.8°179.8°
C06N05C12C13177.9°174.1°
N05C06C07C1153.1°90.0°
C06N05C04H04151.2°65.9°
C06N05C04H04267.1°54.2°
N05C06H061H062117.3°120.0°
C06N05C12H12157.3°54.1°
C06N05C12H12261.5°65.8°
N05C12C13H121120.6°120.0°
N05C12C13H122120.6°120.1°
N05C12C13C0255.6°59.2°
N05C12C13H131176.2°60.8°
N05C12C13H13264.9°179.2°
C12N05C04H04172.0°58.3°
C12N05C04H042169.7°178.3°
C12N05C06H06147.2°70.0°
C12N05C06H06271.1°50.0°
N05C12H121H122118.2°120.0°
C12C13C02H131120.5°120.0°
C12C13C02H132120.5°120.0°
C12C13H131H132118.4°120.1°
C12C13C02H021170.0°177.6°
C13C12H121H122118.1°119.9°
C02C13H131H132118.4°120.1°
C13C02C03H031168.8°177.6°
C13C02C03H03272.6°62.4°
C02C13C12H12165.0°179.2°
C02C13C12H122176.3°60.9°
C13C02O01H01156.7°180.0°
C11C07C06H061174.0°150.1°
C11C07C06H06267.8°30.0°
C11C07C08H081179.7°179.8°
H131C13C02H02169.5°57.7°
H131C13C12H12155.6°59.3°
H131C13C12H12263.2°179.2°
H132C13C02H02149.5°62.4°
H132C13C12H121174.5°60.8°
H132C13C12H12255.8°59.1°
H021C02C03H03172.9°62.4°
H021C02C03H03245.7°57.6°
H021C02O01H01162.4°59.8°
H031C03C04H04148.4°59.1°
H031C03C04H04269.9°60.9°
H032C03C04H041167.0°179.2°
H032C03C04H04248.7°59.2°
H081C08C09H0910.3°0.0°

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon